Job Description P25906 Confidence 23.94% Date Thu Jan 5 11:42:45 GMT 2012 Rank 54 Aligned Residues 230 % Identity 11% Template c3noeA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from pseudomonas2 aeruginosa Resolution 2.95 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		G	A	M	Q	L	A	G	P	G	V	F	G	P	P	R	D	R	H	V	A	I	T	V	L	R	E	A	L	A	L	.	.	.	G	V	N	H	I	D	T	S	D	F	Y	G	P	H	V	T	N	Q	I	I	R	E	A	L	Y	P	Y	S	D	D	L	T	I	V	T	K	I	G	A	R	R	G	E	D	A	S	W
Query Conservation																																.	.	.
Alig confidence														.																		.	.	.																																										.	.	.	.	.	.
Template Conservation														.																																																														.	.	.	.	.	.
Template Sequence		A	I	V	A	V	G	T	T	G	E	S	A	.	T	L	D	V	E	E	H	I	Q	V	V	R	R	V	V	D	Q	V	K	G	R	I	P	V	I	A	G	T	G	A	N	S	T	R	E	A	V	A	L	T	E	A	A	K	S	G	G	A	D	A	C	L	L	V	T	P	Y	Y	N	K	P	.	.	.	.	.	.
Template Known Secondary structure						S	S	T	T	T	T	G	G	.	G																		T	T	S	S									S	S													T	T	T		S									S	S			.	.	.	.	.	.
Template Predicted Secondary structure														.																																																														.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	F	S	P	A	E	L	Q	K	A	V	H	D	N	L	R	N	L	G	L	D	V	L	D	V	V	N	L	R	V	M	M	G	D	G	H	G	P	A	E	G	S	I	E	A	S	L	T	V	L	A	E	M	Q	Q	Q	G	L	V	K	H	I	G	L	S	N	V	T	P	T	Q	V	A	E	A	R	K	I
Query Conservation
Alig confidence		.	.	.	.																		.	.	.																	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																		.	.	.																	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	T	Q	E	G	M	Y	Q	H	F	R	H	I	A	E	A	V	A	.	.	.	I	P	Q	I	L	Y	N	V	P	G	R	T	S	C	D	M	.	.	.	.	.	.	.	L	P	E	T	V	E	R	L	S	K	V	P	N	I	I	G	I	K	E	A	T	G	D	L	Q	R	A	K	E	V	I	E	R
Template Known Secondary structure		.	.	.	.																S		.	.	.	S												S				.	.	.	.	.	.	.										T	S	T	T								S
Template Predicted Secondary structure		.	.	.	.																		.	.	.																	.	.	.	.	.	.	.
Template SS confidence
						111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.								.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.																		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	I	V	C	V	Q	N	E	Y	N	I	A	H	R	A	D	D	A	M	I	D	A	L	A	H	D	G	I	A	Y	V	P	F	F	P	L	G	G	F	T	P	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	T	L	S	D	V	A	A	S	L	G	A	T	P	M	Q	V	A
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		V	G	K	D	F	L	V	.	.	.	.	.	Y	S	G	D	D	A	T	A	V	E	L	M	L	L	G	G	K	G	N	I	S	V	T	A	N	V	A	P	R	A	M	S	D	L	C	A	A	A	M	R	G	D	A	A	A	A	R	A	I	N	D	R	L	M	P	L	H	K	A	L	F	I	E	S	N	P	I	P
Template Known Secondary structure		S		T	T	S			.	.	.	.	.					T	T	T							T	T							S	G	G	G	T															T																			T	T	S	S	S	S	S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	W	L	L	Q	R	S	P	N	I	L	L	I	P	G	T	S	S	V	A	H	L	R	E	N	M	A	A	E	K	L	H	L	S	E	E	V	L	S	T	L	D	G	I	S	R	E
Query Conservation
Alig confidence													.	.								.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.								.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	W	A	L	H	E	M	G	L	I	.	.	P	E	G	I	R	L	P	.	.	.	.	.	.	.	.	.	.	L	T	W	L	S	P	H	C	H	D	P	L	R	Q	A	M	R	Q
Template Known Secondary structure									T	T	S	S	.	.		S				T	T	.	.	.	.	.	.	.	.	.	.	S					G	G	G
Template Predicted Secondary structure													.	.								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.											270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions