Job Description P25906 Confidence 100.00% Date Thu Jan 5 11:42:45 GMT 2012 Rank 3 Aligned Residues 274 % Identity 22% Template c3erpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: structure of idp01002, a putative oxidoreductase from and essential2 gene of salmonella typhimurium Resolution 1.55 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																														.	.																.	.	.
Query SS confidence																																																														.	.																.	.	.
Query Sequence		M	S	S	N	T	F	T	L	G	T	K	S	V	N	R	L	G	Y	G	A	M	Q	L	A	G	P	G	V	F	G	P	P	R	D	R	H	V	A	I	T	V	L	R	E	A	L	A	L	G	V	N	H	I	D	T	S	D	F	Y	G	.	.	P	H	V	T	N	Q	I	I	R	E	A	L	Y	P	Y	.	.	.
Query Conservation																																																														.	.																.	.	.
Alig confidence																										.	.	.	.	.																																.	.																.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		M	E	Y	R	R	C	G	R	S	G	V	K	L	P	A	I	S	L	G	L	W	H	N	F	.	.	.	.	.	G	D	T	T	R	V	E	N	S	R	A	L	L	Q	R	A	F	D	L	G	I	T	H	F	D	L	A	N	N	Y	G	P	P	P	G	S	A	E	C	N	F	G	R	I	L	Q	E	D	F	L	P
Template Known Secondary structure								S	S	S	S					S						S	S	S		.	.	.	.	.	S	T	T	S															T	T								T	T		T	T	T	T	T														T	G	G
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
			76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	D	D	L	T	I	V	T	K	I	G	A	R	R	G	E	D	A	S	W	L	P	A	F	S	P	A	E	L	Q	K	A	V	H	D	N	L	R	N	L	G	L	D	V	L	D	V	V	N	L	R	V	M	M	G	D	G	H	G	P	A	E	G	S	I	E	A	S	L	T	V	L	A	E	M	Q	Q	Q	G
Query Conservation		.
Alig confidence		.																				.																																							.	.	.	.	.	.
Template Conservation																						.																																							.	.	.	.	.	.
Template Sequence		W	R	D	E	L	I	I	S	T	K	A	G	Y	T	M	W	D	G	P	Y	.	G	D	W	G	S	R	K	Y	L	I	A	S	L	D	Q	S	L	K	R	M	G	L	E	Y	V	D	I	F	Y	H	H	R	P	D	P	E	T	P	.	.	.	.	.	.	L	K	E	T	M	K	A	L	D	H	L	V	R	H	G
Template Known Secondary structure		G	G	G	G								S	S			S	S	S	T	T	.	S	S	T	T																	T		S									S			T	T	S		.	.	.	.	.	.														T	T
Template Predicted Secondary structure																						.																																							.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.																		.																										.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.																		.																										.	.	.	.	.	.	.	.	.
Query Sequence		L	V	K	H	I	G	L	S	N	V	T	P	T	Q	V	A	E	A	R	K	I	A	E	.	.	.	.	.	I	V	C	V	Q	N	E	Y	N	I	A	H	R	A	D	D	A	.	M	I	D	A	L	A	H	D	G	I	A	Y	V	P	F	F	P	L	G	G	F	T	P	L	Q	.	.	.	.	.	.	.	.	.
Query Conservation																									.	.	.	.	.																		.																										.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.																		.																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	L	Y	V	G	I	S	N	Y	P	A	D	L	A	R	Q	A	I	D	I	L	E	D	L	G	T	P	C	L	I	H	Q	P	K	Y	S	L	F	E	R	W	V	E	D	G	L	L	A	L	L	Q	E	K	G	V	G	S	I	A	F	S	P	L	A	G	G	Q	L	T	D	R	Y	L	N	I	T	A	D	K
Template Known Secondary structure		S								S																	T									B		B	T	T	B		G	G	G	G	T									T						B	S	T	T	G	G	G	T	S	S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																																		.
Query SS confidence		.	.	.																																																		.
Query Sequence		.	.	.	S	S	T	L	S	D	V	A	A	S	L	G	A	T	P	M	Q	V	A	L	A	W	L	L	Q	R	S	P	N	I	L	L	I	P	G	T	S	S	V	A	H	L	R	E	N	M	A	A	E	.	K	L	H	L	S	E	E	V	L	S	T	L	D	G	I	S	R	E
Query Conservation		.	.	.																																																		.
Alig confidence		.	.	.																																																		.
Template Conservation
Template Sequence		L	E	K	V	R	R	L	N	E	L	A	A	R	R	G	Q	K	L	S	Q	M	A	L	A	W	V	L	R	N	D	N	V	T	S	V	L	I	G	A	S	K	P	S	Q	I	E	D	A	V	G	M	L	A	N	R	R	F	S	A	A	E	C	A	E	I	D	A	I	L	E	G
Template Known Secondary structure															T	T												T	T	T	S										S	S										G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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