Job Description P25906 Confidence 15.58% Date Thu Jan 5 11:42:45 GMT 2012 Rank 68 Aligned Residues 171 % Identity 10% Template c2oz8B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:mll7089 protein; PDBTitle: crystal structure of putative mandelate racemase from mesorhizobium2 loti Resolution 2.48 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		S	N	T	F	T	L	G	T	K	S	V	N	R	L	G	Y	G	A	M	Q	L	A	G	P	G	V	F	G	P	P	R	D	R	H	V	A	I	T	V	L	R	E	A	L	A	L	G	V	N	H	I	D	T	S	D	F	Y	G	P	H	V	T	N	Q	I	I	R	E	A	L	Y	P	.	Y	S	D	D	L	T	I
Query Conservation																																																																										.
Alig confidence																						.	.	.	.	.	.	.	.	.																																												.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		H	V	L	L	G	S	R	R	N	R	V	K	A	Y	A	S	G	L	D	F	.	.	.	.	.	.	.	.	.	H	L	D	D	D	A	F	V	S	L	F	S	H	A	A	S	I	G	Y	S	A	F	K	I	K	V	G	H	R	D	F	D	R	D	L	R	R	L	E	L	L	K	T	C	V	P	A	G	S	K	V
Template Known Secondary structure					T	T		S		S										B	T	.	.	.	.	.	.	.	.	.	T	S															T	T											S	S														T	S		T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140										.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		V	T	K	I	G	A	R	R	G	E	D	A	S	W	L	P	A	F	S	P	A	E	L	Q	K	A	V	H	D	N	L	R	N	L	G	L	D	V	L	D	V	V	N	L	R	V	M	M	G	D	G	H	G	P	A	E	G	S	I	E	A	S	L	T	V	L	A	E	M	Q	Q	Q	.	G	L	V	K	H	I	G
Query Conservation																																																																										.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.											.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Sequence		M	I	D	P	N	E	A	W	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	A	L	T	K	L	V	A	I	R	E	A	G	H	D	L	L	W	V	E	D	P	I	L	R	H	D	.	.	.	.	.	.	.	.	.	.	H	D	G	L	R	T	L	R	H	A	V	T	W	T	Q	I	N	S
Template Known Secondary structure						T	T		B			.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T								S		B		T	T		.	.	.	.	.	.	.	.	.	.													S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.															.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.											230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	N	V	T	P	T	Q	V	A	E	A	R	K	I	A	E	I	V	C	V	Q	N	E	Y	N	I	A	H	R	A	D	D	A	M	I	D	A	L	A	H	D	G	I	A	Y	V	P
Query Conservation
Alig confidence																										.	.
Template Conservation																										.	.
Template Sequence		G	E	Y	L	D	L	Q	G	K	R	L	L	L	E	A	H	A	A	D	I	L	N	V	H	.	.	G	Q	V	T	D	V	M	R	I	G	W	L	A	A	E	L	G	I	P	I	S	I
Template Known Secondary structure			T	T												T	T			S						.	.	S																T
Template Predicted Secondary structure																										.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions