Job Description P25906 Confidence 24.93% Date Thu Jan 5 11:42:45 GMT 2012 Rank 52 Aligned Residues 84 % Identity 20% Template c2k27A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:paired box protein pax-8; PDBTitle: solution structure of human pax8 paired box domain Resolution UNK

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	A	G	P	G	V	F	G	P	P	R	D	R	H	V	A	I	T	V	L	R	E	A	L	A	L	G	V	N	H	I	D	T	S	D	F	Y	G	P	H	V	T	N	Q	I	I	R	E	A	L	Y	P	Y	S	D	D	L	T	I	V	T	K	I	G	A	R	R	G	E	D	A	S	W	L	P	A	F	S	P
Query Conservation
Alig confidence																										.																.	.																	.	.
Template Conservation																										.																.	.																	.	.
Template Sequence		Q	L	G	G	A	F	V	N	G	R	P	L	P	E	V	V	R	Q	R	I	V	D	L	A	.	H	Q	G	V	R	P	C	D	I	S	R	Q	L	R	V	.	.	S	H	G	C	V	S	K	I	L	G	R	Y	Y	E	T	G	.	.	S	I	R	P	G	V	I	G	G	S	K	P	K	V	A	T	P	K	V	V
Template Known Secondary structure						T	T	S	S	S		S	S													.			T											T		.	.		S										S	S	T	T	S	.	.																	T	T
Template Predicted Secondary structure																										.																.	.																	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	Q	K	A	V	H	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	I	G	D	Y	K	R	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions