Return to main results Retrieve Phyre Job Id

Job DescriptionP25906
Confidence20.77%DateThu Jan 5 11:42:45 GMT 2012
Rank58Aligned Residues112
% Identity19%Templatec1xuzA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60 .........70.........80.........90.....
Predicted Secondary structure 









.................















Query SS confidence 



























. . . . . . . . . . . . . . . . .


































Query Sequence  RDRHVAITVLREALALGVNHIDTSDFYG. . . . . . . . . . . . . . . . . PHVTNQIIREALYPYSDDLTIVTKIGARRGEDASW
Query Conservation       
   
  
   


  


  

.................    
  

 

        
 

           
Alig confidence 



























.................

























.........
Template Conservation 
  
    
       

 
 




  


 
    
   



 
  
 


  

  










.........
Template Sequence  LNEEDEIKLKEYVESKGMIFISTPFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMN. . . . . . . . .
Template Known Secondary structure 

TT

ST
S

GGGTT
TT
S

TT
.........
Template Predicted Secondary structure 






















.........
Template SS confidence 















































































   88.90.........100.........110.........120.........130.........140.........150........
 
   96...100.........110.........120.........130.........140.........150.........160.....
Predicted Secondary structure 



































Query SS confidence 





































































Query Sequence  LPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVT
Query Conservation          
      

  
  
 


  

                   

  
   
 
   
 
   
Alig confidence  ....









.






...















....
























Template Conservation  ....

 

  

 . 
   
 ...   



 
 


   ....  

  
  
   

   

 



Template Sequence  . . . . SIESIKKSVE. IIREAGV. . . PYALLHCTNIYPTPYE. . . . DVRLGGMNDLSEAFPDAIIGLSDHT
Template Known Secondary structure  ....
.T
...




SS

....
TT
TTS
S
Template Predicted Secondary structure  ....
.


...








....











Template SS confidence 





































































   159160........ .170..... ....180.........190. ........200.........210......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions