Job Description P25906 Confidence 100.00% Date Thu Jan 5 11:42:45 GMT 2012 Rank 20 Aligned Residues 258 % Identity 22% Template c1vbjB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:prostaglandin f synthase; PDBTitle: the crystal structure of prostaglandin f synthase from2 trypanosoma brucei Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	S	N	T	F	T	L	G	T	K	S	V	N	R	L	G	Y	G	A	M	Q	L	A	G	P	G	V	F	G	P	P	R	D	R	H	V	A	I	T	V	L	R	E	A	L	A	L	G	V	N	H	I	D	T	S	D	F	Y	G	P	H	V	T	N	Q	I	I	R	E	A	L	Y	P	Y	S	D	D	L	T
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.
Template Sequence		L	T	Q	S	L	K	L	S	N	G	V	M	M	P	V	L	G	F	G	M	W	K	L	Q	.	.	.	.	.	.	.	.	.	D	G	N	E	A	E	T	A	T	M	W	A	I	K	S	G	Y	R	H	I	D	T	A	A	I	Y	K	N	E	E	S	A	G	R	A	I	A	S	C	G	V	P	R	E	E	L	F
Template Known Secondary structure									T	T	S					S	B					T	T			.	.	.	.	.	.	.	.	.	T	T												T	T	T								G	G	G	T												S	S	S		G	G	G
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.										.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	T	K	I	G	A	R	R	G	E	D	A	S	W	L	P	A	F	S	P	A	E	L	Q	K	A	V	H	D	N	L	R	N	L	G	L	D	V	L	D	V	V	N	L	R	V	M	M	G	D	G	H	G	P	A	E	G	S	I	E	A	S	L	T	V	L	A	E	M	Q	Q	Q	G	L	V	K	H	I	G
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Sequence		V	T	T	K	L	.	.	.	.	.	.	.	.	.	W	N	S	D	Q	G	Y	E	S	T	L	S	A	F	E	K	S	I	K	K	L	G	L	E	Y	V	D	L	Y	L	I	H	W	P	G	K	D	K	F	.	.	.	.	.	.	.	I	D	T	W	K	A	F	E	K	L	Y	A	D	K	K	V	R	A	I	G
Template Known Secondary structure							.	.	.	.	.	.	.	.	.		G	G	G		S															T	T		S								S			T	T	T	T		.	.	.	.	.	.	.													T	T	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.										.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.								.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		L	S	N	V	T	P	T	Q	V	A	E	A	R	K	I	A	E	I	V	C	V	Q	N	E	Y	N	I	A	H	R	.	A	D	D	A	M	I	D	A	L	A	H	D	G	I	A	Y	V	P	F	F	P	L	G	G	F	T	P	L	Q	S	S	T	L	S	D	V	A	A	S	L	G	A	T	P	M	Q	V	A	L
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		V	S	N	F	H	E	H	H	I	E	E	L	L	K	H	C	K	V	A	P	M	V	N	Q	I	E	L	H	P	L	L	N	Q	K	A	L	C	E	Y	C	K	S	K	N	I	A	V	T	A	W	S	P	L	G	Q	G	H	L	V	E	D	A	R	L	K	A	I	G	G	K	Y	G	K	T	A	A	Q	V	M	L
Template Known Secondary structure				S										T	T	S		S	S										B	T	T	B												T	T							S	T	T	G	G	G	T	S	T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	L	L	Q	R	S	P	N	I	L	L	I	P	G	T	S	S	V	A	H	L	R	E	N	M	A	A	E	K	L	H	L	S	E	E	V	L	S	T	L	D	G	I	S	R
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		R	W	E	I	Q	A	G	V	I	.	.	T	I	P	K	S	G	N	E	A	R	I	K	E	N	G	N	I	F	D	F	E	L	T	A	E	D	I	Q	V	I	D	G	M	N	A
Template Known Secondary structure							T	T			.	.						S												S	S													T	T
Template Predicted Secondary structure											.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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