Job Description P76422 Confidence 100.00% Date Thu Jan 5 12:22:56 GMT 2012 Rank 2 Aligned Residues 253 % Identity 32% Template c3rm5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:hydroxymethylpyrimidine/phosphomethylpyrimidine kinase PDBTitle: structure of trifunctional thi20 from yeast Resolution 2.68 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	I	N	A	L	T	I	A	G	T	D	P	S	G	G	A	G	I	Q	A	D	L	K	T	F	S	A	L	G	A	Y	G	C	S	V	I	T	A	L	V	A	Q	N	T	R	G	V	Q	S	V	Y	R	I	E	P	D	F	V	A	A	Q	L	D	S	V	F	S	D	V	R	I	D	T	T	K	I	G	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	P	T	V	L	S	I	A	G	T	D	P	S	G	G	A	G	I	E	A	D	V	K	T	I	T	A	H	R	C	Y	A	M	T	C	I	T	A	L	N	A	Q	T	P	V	K	V	Y	S	I	N	N	T	P	K	E	V	V	F	Q	T	L	E	S	N	L	K	D	M	K	C	N	V	I	K	T	G	M	L
Template Known Secondary structure														T	T	S	S	S												T	T								S	B						S	S							B																	S			S						S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																			.																																																							.
Query SS confidence																			.																																																							.
Query Sequence		A	E	T	D	I	V	E	A	V	A	E	R	L	Q	R	Y	Q	.	I	Q	N	V	V	L	D	T	V	M	L	A	K	S	G	D	P	L	L	S	P	S	A	V	A	T	L	R	S	R	L	L	P	Q	V	S	L	I	T	P	N	L	P	E	A	A	A	L	L	D	A	P	H	A	.	R	T	E	Q	E	M	L
Query Conservation																			.																																																							.
Alig confidence																			.													.	.	.	.	.	.	.	.																																			.
Template Conservation																																.	.	.	.	.	.	.	.
Template Sequence		T	A	A	A	I	E	V	L	H	E	K	L	L	Q	L	G	E	N	R	P	K	L	V	V	D	P	V	L	V	A	.	.	.	.	.	.	.	.	K	D	I	V	S	L	I	T	E	K	V	A	P	F	A	D	I	L	T	P	N	I	P	E	C	Y	K	L	L	G	E	E	R	K	V	N	G	L	Q	D	I	F
Template Known Secondary structure																	G	G	G													.	.	.	.	.	.	.	.											T	G	G	G		S					B								T	T	S					S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		E	Q	G	R	S	L	L	A	M	.	G	C	G	A	V	L	M	K	G	G	H	L	D	D	E	Q	S	P	D	W	L	F	T	R	E	G	E	Q	R	F	T	A	P	R	I	M	T	K	N	T	H	G	T	G	C	T	L	S	A	A	L	A	A	L	R	P	R	H	T	N	W	A	D	T	V	Q	E	A	K	S
Query Conservation											.
Alig confidence											.															.	.	.
Template Conservation																										.	.	.
Template Sequence		Q	I	A	K	D	L	A	K	I	T	K	C	S	N	I	L	V	K	G	G	H	I	T	D	.	.	.	V	L	F	L	G	A	E	Q	K	F	I	I	F	K	G	N	F	V	N	T	T	H	T	H	G	T	G	C	T	L	A	S	A	I	A	S	N	L	A	R	G	Y	S	L	P	Q	S	V	Y	G	G	I	E
Template Known Secondary structure														S												.	.	.					T	T	T	T													S			B	T																T
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		W	L	S	S	A	L	A	Q	A	D	T	L	.	E	V	G	H	G	I	G	P	V	H	H	F	H	A	W
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		Y	V	Q	N	A	V	A	I	G	C	D	V	T	K	E	T	V	K	N	G	P	I	N	H	V	Y	A	V
Template Known Secondary structure														S		T	T	T				B			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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