Job Description P76422 Confidence 99.34% Date Thu Jan 5 12:22:56 GMT 2012 Rank 55 Aligned Residues 147 % Identity 14% Template c3lhxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ketodeoxygluconokinase; PDBTitle: crystal structure of a ketodeoxygluconokinase (kdgk) from2 shigella flexneri Resolution 1.87 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	V	E	A	V	A	E	R	L	Q	R	Y	Q	I	Q	N	V	V	L	D	T	V	M	L	A	K	S	G	D	P	L	L	S	P	S	A	V	A	T	L	R	S	R	L	L	P	Q	V	S	L	I	T	P	N	L	P	E	A	A	A	L	L	D	A	P	H	A	R	T	E	Q	E	M	L	E	Q	G	R	S
Query Conservation
Alig confidence																						.	.	.	.																																									.	.	.	.	.	.
Template Conservation																						.	.	.	.																																									.	.	.	.	.	.
Template Sequence		E	K	L	L	S	L	L	R	E	C	R	A	K	G	G	K	V	I	F	D	.	.	.	.	N	N	Y	R	P	R	L	W	A	S	K	E	E	T	Q	Q	V	Y	Q	Q	X	L	E	C	T	D	I	A	F	L	T	L	D	D	E	D	A	L	W	G	.	.	.	.	.	.	Q	Q	P	V	E	D	V	I	A	R
Template Known Secondary structure														T	T							.	.	.	.					G	G	G	S	S														T	T		S															.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.																																									.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.							280	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.					.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																			.	.	.	.
Query SS confidence																																			.	.	.	.
Query Sequence		L	L	A	M	G	C	G	A	V	L	M	K	G	G	H	L	D	D	E	Q	S	P	D	W	L	F	T	R	E	G	E	Q	R	.	.	.	.	F	T	A	P	R	I	M	T	K	N	T	H	G	T	G	C	T	L	S	A	A	L	A	A	L	R	P	R	H	T	N	W	A	D	T	V	Q	E	A	K	S	W	L
Query Conservation																																			.	.	.	.
Alig confidence																		.	.	.	.	.													.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		T	H	N	A	G	V	K	E	V	V	V	K	R	G	A	D	.	.	.	.	.	S	C	L	V	S	I	A	G	E	A	L	V	D	V	P	A	V	K	L	P	K	E	K	V	I	D	T	T	A	A	G	D	S	F	S	A	G	Y	L	A	V	R	L	T	G	G	S	A	E	N	A	A	K	R	G	H	L	T	A
Template Known Secondary structure					T	T		S							T	T		.	.	.	.	.							T	T	S												G	G	G					T	T														T	T	T
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.						.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		241	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	A	L	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	V	I	Q	Y
Template Known Secondary structure					T	T	S
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions