Job Description P76422 Confidence 99.74% Date Thu Jan 5 12:22:56 GMT 2012 Rank 21 Aligned Residues 225 % Identity 20% Template c3kzhA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable sugar kinase; PDBTitle: crystal structure of a putative sugar kinase from2 clostridium perfringens Resolution 2.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.			.	.																						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.
Predicted Secondary structure													.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	I	N	A	L	T	I	A	G	T	.	.	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	A	G	I	Q	A	D	L	K	T	F	S	A	L	G	A	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		K	E	P	Y	L	L	V	F	G	A	S	V	V	D	V	F	G	F	S	K	A	S	Y	R	P	Y	N	S	T	P	G	H	V	K	I	S	F	G	G	V	C	R	N	I	A	.	E	N	X	A	R	V	G	V	N	T	N	F	X	S	I	L	G	N	D	E	H	G	K	S	I	V	E	H	S	K	K	I	G	Y
Template Known Secondary structure																					S	S				T	T	S																			.						T	T											S	S														T
Template Predicted Secondary structure																																															.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
														35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	C	S	V	I	T	A	L	V	A	Q	N	T	R	G	V	Q	S	V	Y	.	.	R	I	E	P	D	F	V	A	A	Q	L	D	S	V	F	S	D	V	R	I	D	T	T	K	I	G	M	L	A	E	T	D	I	V	E	A	V	A	E	R	L	Q	R	Y	Q	I	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		H	X	D	D	S	X	V	I	E	G	G	S	T	P	T	Y	L	A	I	L	D	E	N	G	E	X	V	S	A	I	A	D	X	K	S	I	G	A	X	N	T	D	F	I	D	S	K	R	E	I	F	E	N	A	E	Y	T	V	L	D	S	D	N	P	E	I	X	E	Y	L	L	K	N	F	K	D	K	T	N	F
Template Known Secondary structure				T	T					T	T												T	T	S										G	G	G	G	G									T						T		S						S	S													T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	V	L	D	T	V	M	L	A	K	S	G	D	P	L	L	S	P	S	A	V	A	T	L	R	S	R	L	L	P	Q	V	S	L	I	T	P	N	L	P	E	A	A	A	L	L	D	A	P	H	A	R	T	E	Q	E	M	L	E	Q	G	R	S	L	L	A	M	G	C	G	A	V	L	M	K	G	G	H	L
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Sequence		I	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	S	A	E	K	A	S	W	V	K	H	L	I	K	D	F	H	T	I	K	P	N	R	H	E	A	E	I	L	A	G	.	F	P	I	T	D	T	D	D	L	I	K	A	S	N	Y	F	L	G	L	G	I	K	K	V	F	I	S	L	D	A	D
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.			S						T	S	T	T	T	G	G	G		S					B									T	.	S				S															T									G	G	G
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template SS confidence
		164	.	.														.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	E	Q	S	P	D	W	L	F	T	R	E	G	E	Q	R	F	T	A	P	R	I	M	T	K	N	T	H	G	T	G	C	T	L	S	A	A	L	A	A	L	R	P	R	H	T	N	W	A	D	T	V	Q	E	A	K	S	W	L	S	S	A	L	A	Q
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	G	I	F	Y	N	D	G	V	S	C	G	K	I	K	A	T	E	V	D	V	K	N	V	T	G	A	G	D	S	F	V	A	G	L	G	Y	G	Y	X	N	K	X	P	I	E	D	I	V	K	F	A	X	T	X	S	N	I	T	I	S	H
Template Known Secondary structure		.	.	.	.	.							S	S								S	S				S			T	T															T	T																			T	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions