Job Description P76422 Confidence 100.00% Date Thu Jan 5 12:22:56 GMT 2012 Rank 11 Aligned Residues 234 % Identity 19% Template c2r3bA_ PDB info PDB header:transferase Chain: A: PDB Molecule:yjef-related protein; PDBTitle: crystal structure of a ribokinase-like superfamily protein (ef1790)2 from enterococcus faecalis v583 at 1.80 a resolution Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		K	R	I	N	A	L	T	I	A	G	T	D	P	S	G	G	A	G	I	Q	A	D	L	K	T	F	S	A	L	G	A	Y	G	C	S	V	I	T	A	L	V	A	Q	N	T	R	G	V	Q	S	V	Y	R	I	E	.	.	.	.	P	D	F	V	A	A	Q	L	D	S	V	F	S	D	V	R	I	D	T	T	K
Query Conservation																																																									.	.	.	.
Alig confidence																														.	.	.	.																								.	.	.	.
Template Conservation																														.	.	.	.
Template Sequence		N	F	G	R	V	V	L	I	G	G	N	R	Q	Y	G	G	A	I	I	X	S	T	E	A	C	I	N	S	.	.	.	.	G	A	G	L	T	T	V	I	T	D	V	K	N	H	G	P	L	H	A	R	C	P	E	A	X	V	V	G	F	E	E	T	V	L	L	T	N	V	V	E	Q	A	D	V	I	L	I	G
Template Known Secondary structure		G	G										S	S	S															.	.	.	.	T		S								G	G	G									T	T						T	T													S
Template Predicted Secondary structure																														.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	M	L	A	E	T	D	I	V	E	A	V	A	E	R	L	Q	R	Y	Q	I	Q	N	V	V	L	D	T	V	M	L	A	K	S	G	D	P	L	L	S	P	S	A	V	A	T	L	R	S	R	L	L	P	Q	V	S	L	I	T	P	N	L	P	E	A	A	A	L	L	D	A	P	H	A	R	T	E	Q	E
Query Conservation
Alig confidence																									.	.	.	.																			.	.	.	.																									.	.	.
Template Conservation																									.	.	.	.																			.	.	.	.																									.	.	.
Template Sequence		P	G	L	G	L	D	A	T	A	Q	Q	I	L	K	X	V	L	A	Q	H	Q	K	Q	.	.	.	.	Q	W	L	I	I	D	G	S	A	I	T	L	F	S	Q	G	N	F	.	.	.	.	S	L	T	Y	P	E	K	V	V	F	T	P	H	Q	X	E	W	Q	R	L	S	H	L	P	.	.	.	I	E	Q	Q
Template Known Secondary structure		T	T			S	S																T	T	.	.	.	.							T									T	T		.	.	.	.			S	S	G	G	G																		.	.	.	G	G	G
Template Predicted Secondary structure																									.	.	.	.																			.	.	.	.																									.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.				.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	E	Q	G	R	S	L	L	A	M	G	C	G	A	V	L	M	K	G	G	H	L	D	D	E	Q	S	P	D	W	L	F	T	R	E	G	E	Q	R	F	T	A	P	R	I	M	T	K	N	T	H	G	T	G	C	T	L	S	A	A	L	A	A	L	R	P	R	H	T	N	W	A	D	T	V	Q	E	A	K
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.																																																	.
Template Conservation																									.	.	.	.	.	.	.	.																																																	.
Template Sequence		T	L	A	N	N	Q	R	Q	Q	A	K	L	G	S	T	I	V	L	K	S	H	R	T	.	.	.	.	.	.	.	.	T	I	F	H	A	G	E	P	F	Q	N	T	G	G	N	P	G	X	A	T	G	G	T	G	D	T	L	A	G	I	I	A	G	F	L	A	Q	F	K	P	T	I	E	T	I	A	G	A	.
Template Known Secondary structure														T	S						S	T	T		.	.	.	.	.	.	.	.					S	S	S									G	G	G		S	T	T																S		S	S								.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																																																	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.									.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	L	S	S	A	L	A	Q	A	D	T	L	E	V	G	H	G	I	G	P	V	H
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		V	Y	L	H	S	L	I	G	D	D	L	A	.	K	T	D	Y	V	V	L	P	T	K
Template Known Secondary structure													T	.	T	T		S	S
Template Predicted Secondary structure														.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions