Job Description P64488 Confidence 91.27% Date Thu Jan 5 12:08:52 GMT 2012 Rank 41 Aligned Residues 66 % Identity 23% Template c3kv4A_ PDB info PDB header:h3k4me3 binding protein, transferase Chain: A: PDB Molecule:phd finger protein 8; PDBTitle: structure of phf8 in complex with histone h3 Resolution 2.19 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																							.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	L	D	K	G	T	R	P	G	V	Y	P	R	L	S	V	M	H	G	A	V	K	Y	L	G	Y	A	D	E	H	S	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	Q	V	I	L	I	E	A	G	Q	F	A	V	F	P	P	E	K	W	H	N	I	E	A
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.
Template Sequence		H	I	D	F	G	.	.	.	G	T	S	V	W	Y	H	V	L	K	G	E	K	I	F	Y	L	I	R	P	T	N	A	N	L	T	L	F	E	C	W	S	S	S	S	N	Q	N	E	M	F	F	G	D	Q	V	D	K	C	Y	K	C	S	V	K	Q	G	Q	T	L	F	I	P	T	G	W	I	H	A	V	L	T
Template Known Secondary structure					G	G	.	.	.	G										S																						T		S	S	G	G	G	S		G	G	G	G	S	S									T	T							T	T
Template Predicted Secondary structure							.	.	.
Template SS confidence
		247	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		88	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	D	D	T	Y	F	N	I	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	D	C	L	A	F	G	G	N	F
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions