Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB49
Confidence11.46%DateThu Jan 5 11:14:38 GMT 2012
Rank12Aligned Residues19
% Identity37%Templatec2j5dA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: nmr structure of bnip3 transmembrane domain in lipid2 bicelles
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50...
Predicted Secondary structure 




Query SS confidence 




















Query Sequence  LPQFNMPQYFAHGAVLSIFVG
Query Conservation 
  
 

   
 


  



Alig confidence 












..





Template Conservation 



 







..





Template Sequence  LPSLLLSHLLAIG. . LGIYIG
Template Known Secondary structure  ..
Template Predicted Secondary structure  ..
Template SS confidence 




















   166...170........ .180....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions