Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB49
Confidence3.22%DateThu Jan 5 11:14:38 GMT 2012
Rank39Aligned Residues17
% Identity29%Templatec1ku2A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:sigma factor siga; PDBTitle: crystal structure of thermus aquaticus rna polymerase sigma2 subunit fragment containing regions 1.2 to 3.1
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   73......80.........
Predicted Secondary structure 






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Query Sequence  YWWVRHYDKRCRRSDNR
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Template Conservation    


  
   
    
Template Sequence  TWWIRQAINRAIADQAR
Template Known Secondary structure  TTS

Template Predicted Secondary structure 


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   255....260.........270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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