Job Description P16687 Confidence 15.06% Date Thu Jan 5 11:35:34 GMT 2012 Rank 30 Aligned Residues 65 % Identity 15% Template c3lwfD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator (np_470886.1)2 from listeria innocua at 2.06 a resolution Resolution 2.06 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.							.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.																					.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.																					.	.	.	.	.	.
Query Sequence		G	Q	L	L	G	P	T	Y	D	Y	T	H	R	L	L	D	F	T	L	L	A	N	G	E	A	P	T	L	T	T	A	D	S	E	Q	Q	P	S	P	.	.	.	.	.	H	V	F	S	L	L	A	R	Q	G	L	A	K	F	E	E	D	S	G	A	.	.	.	.	.	.	Q	P	D	D	I	T
Query Conservation																																									.	.	.	.	.																					.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.																					.	.	.	.	.	.
Template Conservation
Template Sequence		G	X	K	I	T	T	K	G	R	Y	G	L	T	I	T	L	E	L	A	K	R	I	G	D	G	P	I	S	L	R	S	I	A	Q	D	K	N	L	S	E	H	Y	L	E	Q	L	I	G	P	L	R	N	A	G	I	V	K	S	I	R	G	A	H	G	G	Y	V	L	N	G	D	P	E	K	I	T
Template Known Secondary structure		S	S																			T	T	T	S			B										T																T	T	S						S	T	T							S		T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions