Return to main results Retrieve Phyre Job Id

Job DescriptionP16687
Confidence7.15%DateThu Jan 5 11:35:34 GMT 2012
Rank64Aligned Residues86
% Identity12%Templatec3iukB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of putative bacterial protein of unknown function2 (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold3 similar to that of m32 carboxypeptidases
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70..... ....80.........90.........100........
Predicted Secondary structure 







.....
















Query SS confidence 









































. . . . .
































Query Sequence  VAQIEQQLNLAVDRVMTEGGIADRELAALALKQASGDNVEAI. . . . . FLLRAYRTTLAKLAVSEPLDTTGMRLERRISAV
Query Conservation    


 

   

 

 
  

 
 








 

  

 .....




 





   
 

 
  
   





Alig confidence 









































.....

















......








Template Conservation        

  
                
  
                                 
......         
Template Sequence  LERLISEQEKVAGQIKPGASIEEAKSILNNDPARQIKGTDALKAWXQELSDRAVSELADVHFDIP. . . . . . DVXKTLECX
Template Known Secondary structure  STT


GGGSBTTTB


......GGGS
Template Predicted Secondary structure 


















......






Template SS confidence 















































































   266...270.........280.........290.........300.........310.........320.........330 .........
 
   109110.........120.....
Predicted Secondary structure 










Query SS confidence 
















Query Sequence  YKDIPGGQLLGPTYDYT
Query Conservation 







 



 

 
Alig confidence 
















Template Conservation          
  
  
  
Template Sequence  IAPTDGIYYTGPSDDFS
Template Known Secondary structure 
S





TTSS
Template Predicted Secondary structure 
















Template SS confidence 
















   340.........350......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions