Job Description P37188 Confidence 50.64% Date Thu Jan 5 11:54:59 GMT 2012 Rank 100 Aligned Residues 92 % Identity 13% Template c3afoB_ PDB info PDB header:transferase Chain: B: PDB Molecule:nadh kinase pos5; PDBTitle: crystal structure of yeast nadh kinase complexed with nadh Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																								.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	I	I	V	A	C	G	G	A	V	A	T	S	T	M	A	A	E	E	I	K	E	L	C	Q	N	H	.	.	N	I	P	V	E	L	I	Q	C	R	V	N	E	I	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	M	D	G	V	H	L	I	C	T	T
Query Conservation																														.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	N	V	Y	I	T	K	K	P	W	T	P	S	T	R	E	A	M	V	E	F	I	T	H	L	H	E	S	Y	P	E	V	N	V	I	V	Q	P	D	V	A	E	E	I	S	Q	D	F	K	S	P	L	E	N	D	P	N	R	P	H	I	L	Y	T	G	P	E	Q	D	I	V	N	R	T	D	L	L	V	T	L
Template Known Secondary structure										T	T																				T	T														G	G	G			S		G	G	G		T	T	S																	S
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		58									.	60	.	.	.	.	.	.	.		.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.										.						.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.										.						.	.	.	.
Query Sequence		A	.	.	.	.	.	.	.	.	K	V	D	R	S	F	G	D	I	.	P	L	V	H	G	.	.	.	.	M	P	F	I	S	G	I	G	I	E	A	L	Q	N	K	I	L	T	I	L	Q	G
Query Conservation			.	.	.	.	.	.	.	.										.						.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.										.						.	.	.	.
Template Conservation
Template Sequence		G	G	D	G	T	I	L	H	G	V	S	M	F	G	N	T	Q	V	P	P	V	L	A	F	A	L	G	T	L	G	F	L	S	P	F	D	F	K	E	H	K	K	V	F	Q	E	V	I	S	S
Template Known Secondary structure			S											T	T	T	S											S	S			S	S					G	G	G										T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions