 |
Job Description | P37188 | Confidence | 87.07% | Date | Thu Jan 5 11:54:59 GMT 2012 |
Rank | 53 | Aligned Residues | 57 |
% Identity | 21% | Template | c2wc1A_ |
PDB info |
PDB header:electron transport | Chain: A: PDB Molecule:flavodoxin; |
PDBTitle: three-dimensional structure of the nitrogen fixation2 flavodoxin (niff) from rhodobacter capsulatus at 2.2 a
|
Resolution | 2.17 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | R | K | I | I | V | A | C | G | G | A | V | A | T | S | T | M | A | A | E | E | I | K | E | L | C | Q | N | H | N | I | P | V | E | L | I | Q | C | R | V | N | E | I | E | T | Y | M | D | G | V | H | L | I | C | T | T | A | K |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   | . |
|
|   |
|   |
|   |
|   |
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |   | . |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |   |   |
|
|
Template Sequence |   |
M | A | . |
K | I | G | L | F | F | G | S | D | T | G | T | T | R | K | I | A | K | Q | I | K | D | M | F | D | D | . |
E | V | M | A | K | P | L | N | V | N | R | A | D | V | A | D | F | M | A | Y | D | F | L | I | L | G | T | P | T |
Template Known Secondary structure |   |
|
| . | S |  |  |  |  |  |
|
| S | S | S |  |  |  |  |  |  |  |  |  |  | T | T | S |
| T | . | T | T | B |
|
|
|  |  | G | G | G |
|
|  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
| . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | |
. | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|