Job Description P37188 Confidence 88.39% Date Thu Jan 5 11:54:59 GMT 2012 Rank 43 Aligned Residues 84 % Identity 12% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																.	.	.	.											.	.	.
Query SS confidence																																																.	.	.	.											.	.	.
Query Sequence		M	K	R	K	I	I	V	A	C	G	G	A	V	A	T	S	T	M	A	A	E	E	I	K	E	L	C	Q	N	H	N	I	P	V	E	L	I	Q	C	R	V	N	E	I	E	T	.	.	.	.	Y	M	D	G	V	H	L	I	C	T	.	.	.	T	A	K	V	D	R	S	F	G	D	I	P	L	V	H	G	M
Query Conservation																																																.	.	.	.											.	.	.
Alig confidence														.	.	.	.	.																														.	.	.	.											.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		L	S	L	K	I	A	L	I	S	Q	N	E	.	.	.	.	.	N	L	L	N	L	F	P	K	L	A	L	E	K	N	F	I	P	I	T	K	T	A	S	L	T	R	A	S	K	I	A	F	G	L	Q	D	E	V	D	A	I	I	S	R	G	A	T	S	D	Y	I	K	K	S	V	S	I	P	S	I	S	I	K
Template Known Secondary structure											S			.	.	.	.	.														T																					T	T	T		S														T	T		S	S
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	I	S	G	I	G	I	E	A	L	Q	N	K	I	L	T	I
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		V	.	.	T	R	F	D	T	M	R	A	V	Y	N	A	K	R	F
Template Known Secondary structure			.	.													G	G	G
Template Predicted Secondary structure			.	.
Template SS confidence
		76			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions