Email l.a.kelley@imperial.ac.uk Description P15286 Date Thu Jan 5 11:34:44 GMT 2012 Unique Job ID 1d0d32595f333785

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3chtA_ 48.4 18 PDB header:oxidoreductase Chain: A: PDB Molecule:p-aminobenzoate n-oxygenase; PDBTitle: crystal structure of di-iron aurf with partially bound ligand 2 c3gzxB_ 47.9 13 PDB header:oxidoreductase Chain: B: PDB Molecule:biphenyl dioxygenase subunit beta; PDBTitle: crystal structure of the biphenyl dioxygenase in complex with biphenyl2 from comamonas testosteroni sp. strain b-356 3 d1ktdb2 41.7 31 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 4 d1i3rb2 40.0 38 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 5 d1klub2 38.4 62 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 6 d2pxyd2 38.4 23 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 7 d2iadb2 37.2 38 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 8 d1d5mb2 36.7 50 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 9 d1iakb2 36.4 31 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 10 d1bx2b2 36.1 62 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 11 d1fv1b2 34.2 62 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 12 d1s9vb2 33.8 38 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 13 d1uvqb2 32.8 31 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 14 d3c5zd2 32.7 31 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 15 d1mujb2 32.7 31 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 16 d2nnab2 32.4 31 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 17 d1es0b2 32.1 31 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 18 d1fngb2 32.0 38 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 19 d1dd4c_ 30.1 18 Fold:Ribosomal protein L7/12, oligomerisation (N-terminal) domain Superfamily:Ribosomal protein L7/12, oligomerisation (N-terminal) domain Family:Ribosomal protein L7/12, oligomerisation (N-terminal) domain 20 d1a6ab2 28.8 54 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 21 d1w7ca2 not modelled 27.4 17 Fold:Cystatin-like Superfamily:Amine oxidase N-terminal region Family:Amine oxidase N-terminal region 22 d1ulib_ not modelled 23.6 14 Fold:Cystatin-like Superfamily:NTF2-like Family:Ring hydroxylating beta subunit 23 d1z3xa1 not modelled 22.5 19 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:GUN4-associated domain 24 c2gbxF_ not modelled 21.5 14 PDB header:oxidoreductase Chain: F: PDB Molecule:biphenyl 2,3-dioxygenase beta subunit; PDBTitle: crystal structure of biphenyl 2,3-dioxygenase from sphingomonas2 yanoikuyae b1 bound to biphenyl 25 d1kkxa_ not modelled 20.4 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:ARID-like Family:ARID domain 26 c1dd3C_ not modelled 19.7 19 PDB header:ribosome Chain: C: PDB Molecule:50s ribosomal protein l7/l12; PDBTitle: crystal structure of ribosomal protein l12 from thermotoga maritima 27 c1dd3D_ not modelled 19.7 19 PDB header:ribosome Chain: D: PDB Molecule:50s ribosomal protein l7/l12; PDBTitle: crystal structure of ribosomal protein l12 from thermotoga maritima 28 d1dd4d_ not modelled 19.0 19 Fold:Ribosomal protein L7/12, oligomerisation (N-terminal) domain Superfamily:Ribosomal protein L7/12, oligomerisation (N-terminal) domain Family:Ribosomal protein L7/12, oligomerisation (N-terminal) domain 29 d1g4ma1 not modelled 18.8 24 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Arrestin/Vps26-like 30 c2ib1A_ not modelled 18.7 15 PDB header:apoptosis Chain: A: PDB Molecule:death domain containing membrane protein nradd; PDBTitle: solution structure of p45 death domain 31 c2kkvA_ not modelled 17.9 17 PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: solution nmr structure of an integrase domain from protein2 spa4288 from salmonella enterica, northeast structural3 genomics consortium target slr105h 32 c2hl7A_ not modelled 17.7 21 PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c-type biogenesis protein ccmh; PDBTitle: crystal structure of the periplasmic domain of ccmh from pseudomonas2 aeruginosa 33 c2k9sA_ not modelled 17.2 17 PDB header:transcription Chain: A: PDB Molecule:arabinose operon regulatory protein; PDBTitle: solution structure of dna binding domain of e. coli arac 34 c2kj8A_ not modelled 16.9 16 PDB header:dna binding protein Chain: A: PDB Molecule:putative prophage cps-53 integrase; PDBTitle: nmr structure of fragment 87-196 from the putative phage2 integrase ints of e. coli: northeast structural genomics3 consortium target er652a, psi-2 35 c1nohB_ not modelled 16.5 27 PDB header:viral protein Chain: B: PDB Molecule:head morphogenesis protein; PDBTitle: the structure of bacteriophage phi29 scaffolding protein2 gp7 after prohead assembly 36 d2coba1 not modelled 16.5 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Psq domain 37 c1bl0A_ not modelled 16.4 14 PDB header:transcription/dna Chain: A: PDB Molecule:protein (multiple antibiotic resistance protein); PDBTitle: multiple antibiotic resistance protein (mara)/dna complex 38 c2lboA_ not modelled 16.1 25 PDB header:cell adhesion Chain: A: PDB Molecule:microneme protein 3; PDBTitle: eimeria tenella microneme protein 3 mar_b domain 39 c2kkpA_ not modelled 15.5 16 PDB header:dna binding protein Chain: A: PDB Molecule:phage integrase; PDBTitle: solution nmr structure of the phage integrase sam-like2 domain from moth 1796 from moorella thermoacetica.3 northeast structural genomics consortium target mtr39k4 (residues 64-171). 40 c2wx3A_ not modelled 14.8 46 PDB header:structural protein Chain: A: PDB Molecule:mrna-decapping enzyme 1a; PDBTitle: asymmetric trimer of the human dcp1a c-terminal domain 41 c3lysC_ not modelled 13.7 8 PDB header:recombination Chain: C: PDB Molecule:prophage pi2 protein 01, integrase; PDBTitle: crystal structure of the n-terminal domain of the prophage2 pi2 protein 01 (integrase) from lactococcus lactis,3 northeast structural genomics consortium target kr124f 42 d2g2ub1 not modelled 13.7 25 Fold:BLIP-like Superfamily:beta-lactamase-inhibitor protein, BLIP Family:beta-lactamase-inhibitor protein, BLIP 43 c2kw0A_ not modelled 13.6 21 PDB header:oxidoreductase Chain: A: PDB Molecule:ccmh protein; PDBTitle: solution structure of n-terminal domain of ccmh from escherichia.coli 44 c1giyJ_ not modelled 13.2 20 PDB header:ribosome Chain: J: PDB Molecule:50s ribosomal protein l7/l12; PDBTitle: crystal structure of the ribosome at 5.5 a resolution. this2 file, 1giy, contains the 50s ribosome subunit. the 30s3 ribosome subunit, three trna, and mrna molecules are in the4 file 1gix 45 c3ahrA_ not modelled 13.2 26 PDB header:oxidoreductase Chain: A: PDB Molecule:ero1-like protein alpha; PDBTitle: inactive human ero1 46 c2khqA_ not modelled 12.8 11 PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: solution nmr structure of a phage integrase ssp19472 fragment 59-159 from staphylococcus saprophyticus,3 northeast structural genomics consortium target syr103b 47 c3oa8B_ not modelled 12.7 19 PDB header:heme-binding protein/heme-binding protei Chain: B: PDB Molecule:soxx; PDBTitle: diheme soxax 48 c3ol4B_ not modelled 12.6 27 PDB header:unknown function Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium smegmatis, an ortholog of rv0543c 49 c3btpA_ not modelled 12.5 25 PDB header:dna binding protein, chaperone Chain: A: PDB Molecule:single-strand dna-binding protein; PDBTitle: crystal structure of agrobacterium tumefaciens vire2 in complex with2 its chaperone vire1: a novel fold and implications for dna binding 50 d1usta_ not modelled 12.0 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Linker histone H1/H5 51 c2kj5A_ not modelled 11.9 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:phage integrase; PDBTitle: solution nmr structure of a domain from a putative phage2 integrase protein nmul_a0064 from nitrosospira multiformis,3 northeast structural genomics consortium target nmr46c 52 c2kj9A_ not modelled 11.9 11 PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: nmr structure of intb phage-integrase-like protein fragment2 90-199 from erwinia carotova subsp. atroseptica: northeast3 structural genomics consortium target ewr217e 53 c2nyxB_ not modelled 11.7 36 PDB header:transcription Chain: B: PDB Molecule:probable transcriptional regulatory protein, rv1404; PDBTitle: crystal structure of rv1404 from mycobacterium tuberculosis 54 c2noxP_ not modelled 11.7 19 PDB header:oxidoreductase Chain: P: PDB Molecule:tryptophan 2,3-dioxygenase; PDBTitle: crystal structure of tryptophan 2,3-dioxygenase from ralstonia2 metallidurans 55 d3ebya1 not modelled 11.6 14 Fold:Cystatin-like Superfamily:NTF2-like Family:Ring hydroxylating beta subunit 56 c2dxbR_ not modelled 11.5 26 PDB header:hydrolase Chain: R: PDB Molecule:thiocyanate hydrolase subunit gamma; PDBTitle: recombinant thiocyanate hydrolase comprising partially-modified cobalt2 centers 57 c3pstA_ not modelled 11.4 27 PDB header:nuclear protein Chain: A: PDB Molecule:protein doa1; PDBTitle: crystal structure of pul and pfu(mutate) domain 58 c2ee7A_ not modelled 11.0 11 PDB header:structural protein Chain: A: PDB Molecule:sperm flagellar protein 1; PDBTitle: solution structure of the ch domain from human sperm2 flagellar protein 1 59 c2d96A_ not modelled 10.8 19 PDB header:transcription Chain: A: PDB Molecule:nuclear factor nf-kappa-b p100 subunit; PDBTitle: solution structure of the death domain of nuclear factor nf-2 kappa-b p100 60 d1uzxa_ not modelled 10.8 25 Fold:UBC-like Superfamily:UBC-like Family:UEV domain 61 c3m5bA_ not modelled 10.7 10 PDB header:transcription Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 32; PDBTitle: crystal structure of the btb domain from fazf/zbtb32 62 c2z3xC_ not modelled 10.4 29 PDB header:dna binding protein/dna Chain: C: PDB Molecule:small, acid-soluble spore protein c; PDBTitle: structure of a protein-dna complex essential for dna2 protection in spore of bacillus species 63 d1dd3a1 not modelled 10.3 20 Fold:Ribosomal protein L7/12, oligomerisation (N-terminal) domain Superfamily:Ribosomal protein L7/12, oligomerisation (N-terminal) domain Family:Ribosomal protein L7/12, oligomerisation (N-terminal) domain 64 c2ld7A_ not modelled 10.0 24 PDB header:transcription Chain: A: PDB Molecule:histone deacetylase complex subunit sap30; PDBTitle: solution structure of the msin3a pah3-sap30 sid complex 65 d1iufa1 not modelled 9.9 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Centromere-binding 66 d1ig6a_ not modelled 9.9 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:ARID-like Family:ARID domain 67 c2jhdA_ not modelled 9.7 11 PDB header:cell adhesion Chain: A: PDB Molecule:micronemal protein 1; PDBTitle: crystal structure of toxoplasma gondii micronemal protein 12 bound to 3'-sialyl-n-acetyllactosamine 68 d1s7oa_ not modelled 9.3 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:YlxM/p13-like 69 c2jxjA_ not modelled 9.2 27 PDB header:oxidoreductase Chain: A: PDB Molecule:histone demethylase jarid1a; PDBTitle: nmr structure of the arid domain from the histone h3k42 demethylase rbp2 70 c2khvA_ not modelled 8.9 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:phage integrase; PDBTitle: solution nmr structure of protein nmul_a0922 from2 nitrosospira multiformis. northeast structural genomics3 consortium target nmr38b. 71 d1h9xa1 not modelled 8.7 28 Fold:Cytochrome c Superfamily:Cytochrome c Family:N-terminal (heme c) domain of cytochrome cd1-nitrite reductase 72 c3lsgD_ not modelled 8.6 14 PDB header:transcription regulator Chain: D: PDB Molecule:two-component response regulator yesn; PDBTitle: the crystal structure of the c-terminal domain of the two-2 component response regulator yesn from fusobacterium3 nucleatum subsp. nucleatum atcc 25586 73 c3oioA_ not modelled 8.6 21 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (arac-type dna-binding domain- PDBTitle: crystal structure of transcriptional regulator (arac-type dna-binding2 domain-containing proteins) from chromobacterium violaceum 74 c2krfB_ not modelled 8.5 10 PDB header:transcription Chain: B: PDB Molecule:transcriptional regulatory protein coma; PDBTitle: nmr solution structure of the dna binding domain of competence protein2 a 75 d1zu1a1 not modelled 8.5 14 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:HkH motif-containing C2H2 finger 76 d2b1xb1 not modelled 8.5 7 Fold:Cystatin-like Superfamily:NTF2-like Family:Ring hydroxylating beta subunit 77 d1hlma_ not modelled 8.4 14 Fold:Globin-like Superfamily:Globin-like Family:Globins 78 c2ou2A_ not modelled 8.4 15 PDB header:transferase Chain: A: PDB Molecule:histone acetyltransferase htatip; PDBTitle: acetyltransferase domain of human hiv-1 tat interacting2 protein, 60kda, isoform 3 79 c2jnsA_ not modelled 8.4 13 PDB header:unknown function Chain: A: PDB Molecule:bromodomain-containing protein 4; PDBTitle: solution structure of the bromodomain-containing protein 42 et domain 80 d1dzfa1 not modelled 8.4 9 Fold:Restriction endonuclease-like Superfamily:Eukaryotic RPB5 N-terminal domain Family:Eukaryotic RPB5 N-terminal domain 81 d1wqlb1 not modelled 8.3 18 Fold:Cystatin-like Superfamily:NTF2-like Family:Ring hydroxylating beta subunit 82 d2ozua1 not modelled 8.2 21 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 83 c2ys9A_ not modelled 8.2 28 PDB header:transcription Chain: A: PDB Molecule:homeobox and leucine zipper protein homez; PDBTitle: structure of the third homeodomain from the human homeobox2 and leucine zipper protein, homez 84 d1yqaa1 not modelled 8.1 9 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Linker histone H1/H5 85 d1kv9a1 not modelled 8.1 20 Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinoprotein alcohol dehydrogenase, C-terminal domain 86 d1ijwc_ not modelled 8.1 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 87 c3h9xB_ not modelled 8.0 29 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein pspto_3016; PDBTitle: crystal structure of the pspto_3016 protein from2 pseudomonas syringae, northeast structural genomics3 consortium target psr293 88 c2obuA_ not modelled 7.8 28 PDB header:hormone/growth factor Chain: A: PDB Molecule:gastric inhibitory polypeptide; PDBTitle: solution structure of gip in tfe/water 89 c3ixzA_ not modelled 7.8 18 PDB header:hydrolase Chain: A: PDB Molecule:potassium-transporting atpase alpha; PDBTitle: pig gastric h+/k+-atpase complexed with aluminium fluoride 90 c3l3fX_ not modelled 7.8 39 PDB header:protein binding Chain: X: PDB Molecule:protein doa1; PDBTitle: crystal structure of a pfu-pul domain pair of saccharomyces cerevisiae2 doa1/ufd3 91 d3ejva1 not modelled 7.7 9 Fold:Cystatin-like Superfamily:NTF2-like Family:BaiE/LinA-like 92 c1iijA_ not modelled 7.7 33 PDB header:signaling protein Chain: A: PDB Molecule:erbb-2 receptor protein-tyrosine kinase; PDBTitle: solution structure of the neu/erbb-2 membrane spanning2 segment 93 d1eb7a2 not modelled 7.5 15 Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c peroxidase 94 d1wmga_ not modelled 7.4 11 Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD 95 c2kw7A_ not modelled 7.3 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved domain protein; PDBTitle: solution nmr structure of the n-terminal domain of protein pg_03612 from p.gingivalis, northeast structural genomics consortium target3 pgr37a 96 c2c1dB_ not modelled 7.3 22 PDB header:oxidoreductase Chain: B: PDB Molecule:soxx; PDBTitle: crystal structure of soxxa from p. pantotrophus 97 d3e99a1 not modelled 7.2 7 Fold:Cystatin-like Superfamily:NTF2-like Family:Ring hydroxylating beta subunit 98 c2eqxA_ not modelled 7.2 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:kelch repeat and btb domain-containing protein 4; PDBTitle: solution structure of the back domain of kelch repeat and2 btb domain-containing protein 4 99 d1hcra_ not modelled 7.0 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain