Job Description P15286 Confidence 7.76% Date Thu Jan 5 11:34:44 GMT 2012 Rank 90 Aligned Residues 28 % Identity 39% Template c3l3fX_ PDB info PDB header:protein binding Chain: X: PDB Molecule:protein doa1; PDBTitle: crystal structure of a pfu-pul domain pair of saccharomyces cerevisiae2 doa1/ufd3 Resolution 1.90 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	A	A	E	H	N	L	A	Q	R	L	L	A	A	Q	K	S	H	S	A	R	Q	L	L	A	Q	L	G	E	Y	L	R	L	G	N	N	R	Q	A	V	T	D	Y	I	R	H	N
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Sequence		Y	T	A	A	D	N	F	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	L	P	X	S	.	Y	R	D	Q	V	V	Q	F	I	L	K	N
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T			G	G	.	G
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
		411	.	.	.	.	.	.	.	.	420																				.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions