 |
Job Description | P15286 | Confidence | 18.67% | Date | Thu Jan 5 11:34:44 GMT 2012 |
Rank | 30 | Aligned Residues | 60 |
% Identity | 15% | Template | c2ib1A_ |
PDB info |
PDB header:apoptosis | Chain: A: PDB Molecule:death domain containing membrane protein nradd; |
PDBTitle: solution structure of p45 death domain
|
Resolution | UNK |
|
 |
  |   |
56 | . | . | . | 60 | . | . | . | . | . | |
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | A | G | I | R | H | D | I | G | L | . |
S | G | D | S | P | L | L | S | R | H | F | P | A | A | E | H | N | L | A | Q | R | L | L | A | A | Q | K | S | H | S | A | R | Q | L | L | A | Q | L | G | E | Y | L | R | L | G | N | N | R | Q | A | V | T | D | Y | I |
Query Conservation |   |
|   |   |
|   |   |   |
|
|
| . |   |   |   |   |
|
|   |   |   |
|
|   |   |
|
|
|   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|
|   |   |   | . | . | . | . | . |   |
|   |
|
|
|   |   |
|
Template Sequence |   |
W | Q | E | L | A | G | H | L | G | Y | Q | A | E | A | V | E | T | M | A | C | D | Q | M | P | A | Y | T | L | L | R | N | W | A | A | Q | E | G | N | R | A | T | L | R | V | L | E | D | A | L | A | A | I | . |
. |
. |
. |
. |
G | R | E | D | V | V | Q | V | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  |  |  |  | T | T | S | S | S | S | S | T | T | S | T | T |  |  |  |  |  |  |  | T | T | . | . | . | . | . | T |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
210 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|