Job Description P17334 Confidence 6.83% Date Thu Jan 5 11:36:06 GMT 2012 Rank 74 Aligned Residues 188 % Identity 6% Template d1pv7a_ SCOP info MFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter Resolution 3.60

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		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	N	G	I	M	T	P	W	A	L	E	N	I	A	T	Y	Q	Q	Y	G	S	V	E	A	A	L	A	A	G	K	T	F	H	I	W	A	K	P	M	L	D	S	F	I	F	L	G	G	S	G	A	T	L	G	L	I	L	A	I	F	I	A	S	R	R	A	D	Y	R	Q	V	A	K	L	A	L	P	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	W	F	L	S	L	Y	V	I	G	V	S	C	T	Y	D	V	F	D	Q	Q	F	A	N	F	F	T	S	F	F	A	T	G	E	Q	G	T	R	V	F	G	Y	V	T	T	M	G	E	L	L	N	A	S	I	M	F	F	A	P	L	I	I	N	R	I	G	G	K	N	A	L	L	L	A	G	T	I	M	S
Template Known Secondary structure																													T	T	S	S	S																									T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.										.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.
Query Sequence		I	F	Q	I	N	E	P	I	L	F	G	L	P	I	I	M	N	P	V	M	F	I	P	F	V	L	V	Q	P	I	L	A	A	I	T	L	A	.	.	.	.	.	.	.	.	.	A	Y	Y	M	G	I	I	P	P	V	T	N	I	A	P	W	T	M	P	T	G	L	G	A	F	F	N	T	N	G	S	V	A	A
Query Conservation																																							.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	I	I	G	S	S	F	A	T	S	A	L	E	V	V	I	L	K	T	L	H	M	F	E	V	P	F	L	L	V	G	C	F	K	Y	I	T	S	Q	F	E	V	R	F	S	A	T	I	Y	L	V	C	F	C	F	F	K	Q	L	A	M	I	F	M	S	V	L	A	G	N	M	Y	E	S	I	G	F	Q	G
Template Known Secondary structure									T																																	S		G	G	G										T	T	T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	V	A	L	F	N	L	G	I	A	T	L	I	Y	L	P	F	V	V	V	A	N	K	A	Q	N	A	I	D	K	E	E	S	E	E	D	I	A
Query Conservation
Alig confidence																				.	.
Template Conservation																				.	.
Template Sequence		A	Y	L	V	L	G	L	V	A	L	G	F	T	L	I	S	V	F	.	.	T	L	S	G	P	G	P	L	S	L	L	R	R	Q	V	N	E	V	A
Template Known Secondary structure																				.	.		S			S	S		T	T
Template Predicted Secondary structure																				.	.
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.			.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions