Job Description P17334 Confidence 6.11% Date Thu Jan 5 11:36:06 GMT 2012 Rank 85 Aligned Residues 78 % Identity 14% Template c3hzqA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: structure of a tetrameric mscl in an expanded intermediate2 state Resolution 3.82 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	F	I	P	F	V	L	V	Q	P	I	L	A	A	I	T	L	A	A	Y	Y	M	G	I	I	P	P	V	T	N	I	A	P	W	T	M	P	T	G	L	G	A	F	F	N	T	N	G	S	V	A	A	L	L	V	A	L	F	N	L	G	I	A	T	L	I	Y	L	P	F	V	V	V	A	N	K	A	Q	N	A
Query Conservation
Alig confidence																				.	.													.
Template Conservation																				.	.													.
Template Sequence		L	A	I	A	V	V	M	G	A	A	F	N	K	I	I	C	S	L	.	.	V	E	N	I	I	M	P	L	I	G	K	I	.	F	G	S	V	D	F	A	K	E	W	S	F	W	G	I	K	Y	G	L	F	I	Q	S	V	I	D	F	I	I	I	A	F	A	L	F	I	F	V	K	I	A	N	T	L	M	K	K
Template Known Secondary structure																				.	.				T								S	.	S	S		S				T	T				S	S				T																										S
Template Predicted Secondary structure																				.	.													.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		437
Predicted Secondary structure
Query SS confidence
Query Sequence		I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		94

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions