Job Description P17334 Confidence 7.86% Date Thu Jan 5 11:36:06 GMT 2012 Rank 42 Aligned Residues 134 % Identity 11% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

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		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		G	G	S	G	A	T	L	G	L	I	L	A	I	F	I	A	S	R	R	A	D	Y	R	Q	V	A	K	L	A	L	P	S	G	I	F	Q	I	N	E	P	I	L	F	G	L	P	I	I	M	N	P	V	M	F	I	P	F	V	L	V	Q	P	I	L	A	A	I	T	L	A	A	Y	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.					.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.					.	.	.
Template Sequence		L	A	A	C	V	L	T	S	V	A	I	S	S	A	L	H	K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	.	.	.	.	M	P	Y	G	.	.	.	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E
Template Known Secondary structure																T	S	T	T											G	G	G						T	T	T	T	T	T	T		S	.	.	.	.					.	.	.
Template Predicted Secondary structure																																															.	.	.	.					.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.					.	.	.	.				.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
			377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.														.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure		.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	Y	M	G	I	I	P	P	V	T	N	I	A	P	W	T	M	P	T	G	L	G	A	F	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	G	S	V	A	A	L	L	V	A	L	F	N	L	G	I	A	T	L	I	Y	L	P	F	V	V	V	A	N	K	A	Q	N	A	I	D	K	E	E	S
Query Conservation		.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H	G	I	P	G	I	I	G	G	I	V	G	A	V	T	A	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q	P	S	D	E	N	C	F	E
Template Known Secondary structure									T	T						T																																																			T	S	T	T	S					T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		443	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	V
Template Known Secondary structure		G	G	G
Template Predicted Secondary structure
Template SS confidence
		432	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions