Job Description P17334 Confidence 48.99% Date Thu Jan 5 11:36:06 GMT 2012 Rank 5 Aligned Residues 139 % Identity 16% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		F	L	G	G	S	G	A	T	L	G	L	I	L	A	I	F	I	A	S	R	R	A	D	Y	R	Q	V	A	K	L	A	L	P	S	G	I	F	Q	I	N	E	P	I	L	F	G	L	P	I	I	M	N	P	V	M	F	I	P	F	V	L	V	Q	P	I	L	A	A	I	T	L	A	A	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																																															.		.	.	.	.					.	.	.																.	.	.	.	.	.	.
Template Conservation																																															.		.	.	.	.					.	.	.
Template Sequence		L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	G	K	A	S	I	V	D	M	A	N	A	A	L	A	G	G	V	A	I	G	S	V	C	N	I	.	V	.	.	.	.	G	P	V	G	.	.	.	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M
Template Known Secondary structure																				T	T	T											T	T							T	T	T	T	T	T	.	S	.	.	.	.					.	.	.																		T
Template Predicted Secondary structure																																															.		.	.	.	.					.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.					.	.	.	.				.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
				376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.								.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure		.	.																											.	.	.	.	.	.	.
Query SS confidence		.	.																											.	.	.	.	.	.	.
Query Sequence		.	.	Y	Y	M	G	I	I	P	P	V	T	N	I	A	P	W	T	M	P	T	G	L	G	A	F	F	N	.	.	.	.	.	.	.	T	N	G	S	V	A	A	L	L	V	A	L	F	N	L	G	I	A	T	L	I	Y	L	P	F	V	V	V	A	N	K	A	Q	N	A	I	D	K	E	E	S	E	E	D	I
Query Conservation		.	.																											.	.	.	.	.	.	.
Alig confidence		.	.																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V	A	Q	L	T	G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	H	E	F	I	H	L
Template Known Secondary structure						S					T	T						T	T														S	T	T																													T	T				S	S	T	T		G	G	G	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		447	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	P
Template Known Secondary structure				G
Template Predicted Secondary structure
Template SS confidence
		388	.	390

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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