Job Description P75749 Confidence 19.00% Date Thu Jan 5 12:13:47 GMT 2012 Rank 64 Aligned Residues 136 % Identity 13% Template c3hs8A_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:adaptor protein complex ap-2, alpha 2 subunit; PDBTitle: intersectin 1-peptide-ap2 alpha ear complex Resolution 1.90 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	R	I	V	F	N	A	N	D	K	A	T	S	L	R	I	E	N	Q	S	D	K	L	P	Y	L	A	Y	S	W	I	E	N	E	K	G	E	K	S	D	A	L	L	V	A	L	P	P	I	Q	R	L	E	P	K	A	T	S	Q	V	R	V	V	K	Q	A	S	T	T	Q	L	P	G	D	R	E	T	L	F
Query Conservation
Alig confidence																																																																							.	.	.	.
Template Conservation																																																																							.	.	.	.
Template Sequence		G	L	K	S	E	F	R	Q	N	L	G	R	M	F	I	F	Y	G	N	K	T	S	T	Q	F	L	N	F	T	P	T	L	I	C	A	D	D	L	Q	T	N	L	N	L	Q	T	K	P	V	D	P	T	V	D	G	G	A	Q	V	Q	Q	V	V	N	I	E	C	I	S	.	.	.	.	D	F	T	E	A	P	V
Template Known Secondary structure									T	T												S	S	S		B	B	S									T	T														S		B		T	T													S	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.
Template SS confidence
		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.					.	.	.	.	.	.	800
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	N	M	R	E	I	P	P	A	P	D	K	S	S	D	H	A	I	L	Q	V	A	I	Q	S	R	I	K	L	F	W	R	P	A	A	L	R	K	K	A	G	E	K	V	E	L	Q	L	Q	V	S	Q	Q	G	N	Q	L	T	L	K	N	P	T	A	Y
Query Conservation
Alig confidence										.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		L	N	I	Q	F	R	Y	G	.	.	.	.	.	.	G	T	F	Q	N	V	S	V	K	L	P	I	T	L	N	K	F	F	Q	P	T	E	M	A	S	Q	D	F	F	Q	R	W	K	Q	L	S	N	P	Q	Q	E	V	Q	N	I	F	K	A	K	H	P	M
Template Known Secondary structure									T	.	.	.	.	.	.	T													G	G	G	G																				S	G	G	G									S	S
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		801	.	.	.	.	.	.	.							.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions