Job Description P75749 Confidence 27.02% Date Thu Jan 5 12:13:47 GMT 2012 Rank 57 Aligned Residues 107 % Identity 8% Template c3h6aB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-4; PDBTitle: structure of the calx-beta domain of integrin beta42 crystallized in the presence of calcium Resolution 1.61 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	P	D	R	T	R	I	V	F	N	A	N	D	K	A	T	S	L	R	I	E	N	Q	S	D	K	L	P	Y	L	A	Y	S	W	I	E	N	E	K	G	E	K	S	D	A	L	L	V	A	L	P	P	I	Q	R	L	E	P	K	A	T	S	Q	V	R	V	V	K	Q	A	S	T	T	Q	L	P	G	D	R
Query Conservation
Alig confidence																																																																	.
Template Conservation																																																																	.
Template Sequence		V	S	F	E	Q	P	E	F	S	V	S	R	G	D	Q	V	A	R	I	P	V	I	R	R	V	L	D	G	G	K	S	Q	V	S	Y	R	T	Q	D	G	T	A	Q	G	N	R	D	Y	I	P	V	E	G	E	L	L	F	Q	P	G	E	A	W	.	K	E	L	Q	V	K	L	L	E	L	L	L	R	G	R	Q
Template Known Secondary structure					S		S						T	T		S										S			S	S											S	S	S		B	T	T	T	B											T	T				.							B						T	T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		992	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.		.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	L	F	F	Y	N	M	R	E	I	P	P	A	P	D	K	S	S	D	H	A	I	L	Q	V	A	I	Q
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		V	R	R	F	H	V	Q	L	S	N	.	P	K	F	G	A	H	L	G	Q	P	H	S	T	T	I	I	I	R
Template Known Secondary structure												.			T	T					S		S
Template Predicted Secondary structure												.
Template SS confidence
		1076	.	.	.	1080	.	.	.	.	.		.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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