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Job DescriptionP75749
Confidence96.20%DateThu Jan 5 12:13:47 GMT 2012
Rank21Aligned Residues88
% Identity17%Templatec1z9oB_
PDB info PDB header:protein binding/lipid binding proteinChain: B: PDB Molecule:vesicle-associated membrane protein-associated protein a; PDBTitle: 1.9 angstrom crystal structure of the rat vap-a msp homology domain in2 complex with the rat orp1 ffat motif
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VQPDR. TRIVFNA. . . NDKATSLRIENQSDKLPYLAYSWIENEKGEKSDALLVALPPIQRLEPKATSQVRVVKQASTTQL
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Template Sequence  LVLDPPSDLKFKGPFTDVVTTNLKLQNPSDR. KVCFKVKTTAPRR. . . . . . YCVRPNSGVIDPGSIVTVSVMLQPFDYDP
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Query Sequence  PGDRETLFFYNMREIPPAP
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Template Sequence  NEKSKHKFMVQTIFAPPSD
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   81........90.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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