Job Description P75749 Confidence 8.76% Date Thu Jan 5 12:13:47 GMT 2012 Rank 80 Aligned Residues 168 % Identity 17% Template c1l9mB_ PDB info PDB header:transferase Chain: B: PDB Molecule:protein-glutamine glutamyltransferase e3; PDBTitle: three-dimensional structure of the human transglutaminase 32 enzyme: binding of calcium ions change structure for3 activation Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																																														.	.
Query SS confidence																			.	.	.																																														.	.
Query Sequence		A	N	D	K	A	T	S	L	R	I	E	N	Q	S	D	K	L	.	.	.	P	Y	L	A	Y	S	W	I	E	N	E	K	G	E	K	S	D	A	L	L	V	A	L	P	P	I	Q	R	L	E	P	K	A	T	S	Q	V	R	V	V	K	Q	A	S	T	.	.	T	Q	L	P	G	D	R	E	T	L	F	F	Y
Query Conservation																			.	.	.																																														.	.
Alig confidence																			.	.	.																			.																											.	.				.
Template Conservation																																								.																																.
Template Sequence		G	K	E	V	N	L	V	L	L	L	K	N	L	S	R	D	T	K	T	V	T	V	N	M	T	A	W	T	I	I	Y	N	G	T	L	V	H	E	.	V	W	K	D	S	A	T	M	S	L	D	P	E	E	E	A	E	H	P	I	K	I	S	Y	A	Q	Y	E	R	Y	L	.	K	S	D	N	M	I	R	I	T
Template Known Secondary structure		T	S												S	S	S															T	T							.												T	T																T	T		.		T	T
Template Predicted Secondary structure																																								.																																.
Template SS confidence
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.		.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.		.	.	.	.	.	.	570	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	R	E	I	P	P	A	P	D	K	S	S	D	H	A	I	L	Q	V	A	I	Q	S	R	I	K	L	F	W	R	P	A	A	L	R	K	K	A	G	E	K	V	E	L	Q	L	Q	V	S	Q	Q	G	N	Q	L	T	L	K	N	P	T	A	Y	Y	L	T	I	A	Y	L	G	R	N	E	K	G	V	L	P
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template Sequence		A	V	C	K	V	P	.	.	.	.	.	.	.	.	.	D	E	S	E	V	V	V	E	R	D	I	I	L	D	N	P	T	L	T	L	E	V	L	N	E	A	R	V	R	K	P	V	N	V	Q	.	.	.	.	.	M	L	F	S	N	P	L	D	E	P	V	R	D	C	V	L	M	V	E	G	S	G	L	L	L
Template Known Secondary structure							T	.	.	.	.	.	.	.	.	.	T													B										S			B	T	T							.	.	.	.	.							S	S	S		B		S								T	T	T	S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.																																				.	.	.	.	.
Template SS confidence
		573	.	.	.	.	.										.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.						.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
		188	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure				.	.	.																	.	.
Query SS confidence				.	.	.																	.	.
Query Sequence		G	F	.	.	.	K	T	V	M	V	A	P	F	S	T	V	N	T	N	T	G	.	.	S	Y	S	G	S	Q	F	Y	L	G	Y
Query Conservation				.	.	.																	.	.
Alig confidence				.	.	.																	.	.
Template Conservation
Template Sequence		G	N	L	K	I	D	V	P	T	L	G	P	K	E	R	S	R	V	R	F	D	I	L	P	S	R	S	G	T	K	Q	L	L	A
Template Known Secondary structure		S									B		T	T													S
Template Predicted Secondary structure
Template SS confidence
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions