Return to main results Retrieve Phyre Job Id

Job DescriptionP77318
Confidence33.67%DateThu Jan 5 12:27:41 GMT 2012
Rank38Aligned Residues44
% Identity34%Templated2iw0a1
SCOP info7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase NodB-like polysaccharide deacetylase
Resolution1.81

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   55....60.........70.........80.........90.........100.........110. ........120.........130...
Predicted Secondary structure 

















































.







Query SS confidence 
























































.





















Query Sequence  KGKPNIIVLTMDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAIEAAQKSTPT. LLSLMDEGVRFTNGYVAHGVSG
Query Conservation    




 
  

 
       
                             
 


.

 

  

 
 
 
     
 
Alig confidence 












.




...................................


.





















Template Conservation        
 




.

   ...................................   

  
    






 
  
  
Template Sequence  CTQPGLVALTYDD. GPFTF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TPQLLDILKQNDVRATFFVNGNNWAN
Template Known Secondary structure 
SSSSS.
S
TT...................................T



SBSSSB
Template Predicted Secondary structure 






.



...................................









Template SS confidence 















































































   38.40.........50 ..... ....60.........70.........80.
 
   134
Predicted Secondary structure 
Query SS confidence 
Query Sequence  P
Query Conservation 
Alig confidence 
Template Conservation   
Template Sequence  I
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 
   82
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions