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Job DescriptionP77318
Confidence100.00%DateThu Jan 5 12:27:41 GMT 2012
Rank14Aligned Residues337
% Identity22%Templatec3q3qA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alkaline phosphatase; PDBTitle: crystal structure of spap: an novel alkaline phosphatase from2 bacterium sphingomonas sp. strain bsar-1
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TEYSTKGKPN. IIVLTMDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAIEAAQKSTPTLLSLMDEGVRFTNGYVA
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Template Sequence  ARSIAATPPKLIVAISVDQFSADLFSEYRQY. . . . . . . . . . . . . . . . . . . . . . . . . . . . YTGGLKRLTSEGAVFPRGYQS
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   32.......40.........50.........60.. .......70.........80...
 
   129130 .........140.........150... ......160.........170........
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Query Sequence  HG. . VSGPSRAAIMTGRAPARFGVYSN. . . . . . . . . . . . . . . . . . . . . . . . . . . . TDAQDGIPLTETFLPELFQNHGYYT
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Template Sequence  HAATETCPGHSTILTGSRPSRTGIIANNWFDLDAKREDKNLYCAEDESQPGSSSDKYEASPLHLKVPTLGGRMKAANPAT
Template Known Secondary structure  SS

STTS




SS
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BTTB

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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   179180.........190.........200...... ...210.........220.........230.
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Query Sequence  AAVGKWHLSKISNVPVPEDKQTRDYHDN. . . . . . . . . . . . . . . . . . . . . . . . . . . FTTFSAEEWQPQNRGFDYFMGFHAA
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Template Sequence  RVVSVAGKDRAAIMMGGATADQVWWLGGPQGYVSYKGVAPTPLVTQVNQAFAQRLAQPNPGFELPAQCVSKDFPVQAGNR
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SS
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TS
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GGGGGG


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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   232.......240.........250.........260........ .270.........280.........290.........300.........
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Query Sequence  GTAYYNSPSLFKNRERVPAKGYISDQLTDEAIGVVDR. . AKTLDQPFMLYLAYNAPHLPNDNPAPDQYQKQFNTGSQTAD
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Template Sequence  TVGTGRFARDAGDYKGFRISPEQDAMTLAFAAAAIENMQLGKQAQTDIISIGLSATDY. . . . . . . . . . . . VGHTFGTEGT
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B
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   244.....250.........260.........270.........280.........290.........300. ........310.
 
   310.........320.........330.........340........
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Query Sequence  NYYASVYSVDQGVKRILEQLKKNGQYDNTIILFTSDNGA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ESCIQVDRLDTELGAFFDKLDKDG. . IDYVVVLTADHGGHDLPERHRMNAMPMEQRVDMALTPKALNATIAEKAGLPGKK
Template Known Secondary structure  TT..


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TTTT
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   312.......320.........330..... ....340.........350.........360.........370.........380.........
 
  
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Template Sequence  VIWSDGPSGDIYYDKGLTAAQRARVETEALKYLRAHPQVQTVFTKAEIAATPSPSGPPESWSLIQEARASFYPSRSGDLL
Template Known Secondary structure 
SSSS
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   390.........400.........410.........420.........430.........440.........450.........460.........
 
   349350.........360.........370.........380.........390.........400.........410.........420..
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Query Sequence  . . . . . . VIDGPLPLNGAQKGYKSQTYPGGTHTPMFMWWKGKLQPGNYDKLISAMDFYPTALDAADISIPKDLKLDGVSLL
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Template Sequence  LLLKPRVMSIPEQAVMGSVATHGSPWDTDRRVPILFWRKG. MQHFEQPLGVETVDILPSLAALIKLPVPKD. QIDGRCLD
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   470.........480.........490.........500......... 510.........520.........530......... 540.......
 
   423......430
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Query Sequence  PWLQDKKQ
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Template Conservation          
Template Sequence  LVAGKDDS
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   548.550.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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