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Job DescriptionP77318
Confidence100.00%DateThu Jan 5 12:27:41 GMT 2012
Rank8Aligned Residues389
% Identity24%Templatec3b5qB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative sulfatase yidj; PDBTitle: crystal structure of a putative sulfatase (np_810509.1)2 from bacteroides thetaiotaomicron vpi-5482 at 2.40 a3 resolution
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100.........110.........120.........130.....
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Query Sequence  GKPNIIVLTMDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAIEAAQKSTPTLLSLMDEGVRFTNGYVAHGVSGPS
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Template Sequence  EKPNFLIIQCDHLTQRVVGAYGQT. . . . . . . . . . . . . . . . . . . . . . . . . . QGCTLPIDEVASRGVIFSNAYVGCPLSQPS
Template Known Secondary structure 


TT

TTTSGGGSS
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SBS
BB
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   14.....20.........30....... ..40.........50.........60.......
 
   136...140.........150...... ...160.........170.........180.........190.........200.........210...
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Query Sequence  RAAIMTGRAPARFGVYSNTDA. . QDGIPLTETFLPELFQNHGYYTAAVGKWHLSKISNVPVPEDKQTRDYHDNFTTFSAE
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Template Sequence  RAALWSGXXPHQTNVRSNSSEPVNTRLPENVPTLGSLFSESGYEAVHFGKTHDX. . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TS
T

SS

TTTS



TTS

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   68.70.........80.........90.........100.........110.........120.
 
   214.....220.........230.........240.........250.........260.........270.........280.........290...
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Query Sequence  EWQPQNRGFDYFMGFHAAGTAYYNSPSLFKNRERVPAKGYISDQLTDEAIGVVDRAKTLDQPFMLYLAYNAPHLPNDNPA
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Template Sequence  . . . GSLRGFKHKEPVAKPFTDPEF. . . . . . . . . PVNNDSFLDVGTCEDAVAYLSNPP. . KEPFICIADFQNPHNICGFIG
Template Known Secondary structure  ...TTTTTS








SSS.........


S

..SSS
TTTT
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   122.......130.........140.. .......150.........160...... ...170.........180.......
 
   294.....300.........310.........320.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PDQYQKQFNTGSQTADNYYASVYSVDQGVKRILEQL
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Template Sequence  ENAGVHTDRPISGPLPELPDNFDVEDWSNIPTPVQYICCSHRRXTQAAHWNEENYRHYIAAFQHYTKXVSKQVDSVLKAL
Template Known Secondary structure  T
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SS





TT
S
S
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   188.190.........200.........210.........220.........230.........240.........250.........260.......
 
   330.........340.........350.........360.........370.........380.........390. ........400......
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Query Sequence  KKNGQYDNTIILFTSDNGAVIDGPLPLNGAQKGYKSQTYPGGTHTPMFMWWKGKLQPGNYDK. . . LISAMDFYPTALDAA
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Template Sequence  YSTPAGRNTIVVIXADHGDGXASHR. . . . . XVTKHISFYDEXTNVPFIFAGPGIKQQKKPVDHLLTQPTLDLLPTLCDLA
Template Known Secondary structure  TTSTTGGGS



TTGGG.....

S
SS


B

STT



SS
B
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   268.270.........280.........290.. .......300.........310.........320.........330.........340..
 
   407..410.........420.........430.........440.........450.........460.........470.........480......
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Query Sequence  DISIPKDLKLDGVSLLPWLQDKKQGEPHKNLTWITSYSHWFDEENIPFWDNYHKFVRHQSDDYPHNPNTEDLSQFSYTVR
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Template Sequence  GIAVPAE. . KAGISLAPTLRGEKQKKSHPYVVSEWHSEYE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YVTTPGRXVR
Template Known Secondary structure  T



TT..





TS





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SSS..............................S
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   343...... 350.........360.........370.........380 .........390
 
   487..490.........500...... ...510....... ..520.........530.........540.......
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Query Sequence  NNDYSLVYTVENNQLGLYKL. TDLQQKDNLAA. . ANPQVVKEMQGVVREFIDSSQPPLSEVNQE
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Template Sequence  GPRYKYTHYLEGNGEELYDXKKDPGERKNLAKDPKYSKILAEHRALLDDYITRSKDDYRSLKVD
Template Known Secondary structure 
SSTGGGTTT
TT




TT
GGGT

GGG


B
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   391........400.........410.........420.........430.........440.........450....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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