Job Description P0A7V3 Confidence 100.00% Date Thu Jan 5 11:06:18 GMT 2012 Rank 9 Aligned Residues 183 % Identity 26% Template c3izbB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein rps3 (s3p); PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome Resolution NULL Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		K	V	R	Q	Y	L	T	K	E	L	A	K	A	S	V	S	R	I	V	I	E	R	P	A	K	S	I	R	V	T	I	H	T	A	R	P	G	I	V	I	G	K	K	G	E	D	V	E	K	L	R	K	V	V	A	D	I	A	G	V	.	.	.	P	A	Q	I	N	I	A	E	V	R	K	P	E	L	D	A	K
Query Conservation																																																														.	.	.
Alig confidence																																																														.	.	.
Template Conservation
Template Sequence		E	L	N	E	F	F	T	R	E	L	A	E	E	G	Y	S	G	V	E	V	R	V	T	P	T	K	T	E	V	I	I	R	A	T	R	T	Q	D	V	L	G	E	N	G	R	R	I	N	E	L	T	L	L	V	Q	K	R	F	K	Y	A	P	G	T	I	V	L	Y	A	E	R	V	Q	D	R	G	L	S	A	V
Template Known Secondary structure											T	S	S	S	S	S									T	T									S	T							S	T	T	S								T	S	T	T	T	T	T			S											S		S	T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		L	V	A	D	S	I	T	S	Q	L	E	R	R	V	M	F	R	R	A	M	K	R	A	V	Q	N	A	M	R	L	G	A	K	G	I	K	V	E	V	S	G	R	L	G	G	A	E	I	A	R	T	E	W	Y	R	E	G	R	V	P	.	.	L	H	T	L	R	A	D	I	D	Y	N	T	S	E	A	H	T	T
Query Conservation																																																														.	.
Alig confidence																																															.															.	.
Template Conservation																																															.
Template Sequence		A	Q	A	E	S	M	K	F	K	L	L	N	G	L	A	I	R	R	A	A	Y	G	V	V	R	Y	V	M	E	S	G	A	K	G	C	E	V	V	V	S	G	K	L	R	A	.	A	R	A	K	A	M	K	F	A	D	G	F	L	I	H	S	G	Q	P	V	N	D	F	I	D	T	A	T	R	H	V	L	M	R
Template Known Secondary structure																															T			S						B		S		G	G	G	.	S	S				B									S	S	S	S		T	T													S
Template Predicted Secondary structure																																															.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.									.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.
Query Sequence		Y	G	V	I	G	V	K	V	W	I	F	K	G	E	I	.	.	.	.	.	.	.	.	L	G	G	M	A	A	V	E	Q	P	E	K	P	A
Query Conservation																	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	G	V	L	G	I	K	V	K	I	M	R	D	P	A	K	S	R	T	G	P	K	A	L	P	D	A	V	T	I	I	E	P	K	E	E	E
Template Known Secondary structure		S														S	S	S						S		S								S	S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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