Job Description P0A7V3 Confidence 100.00% Date Thu Jan 5 11:06:18 GMT 2012 Rank 2 Aligned Residues 206 % Identity 52% Template c1pnxC_ PDB info PDB header:ribosome Chain: C: PDB Molecule:30s ribosomal protein s3; PDBTitle: crystal structure of the wild type ribosome from e. coli,2 30s subunit of 70s ribosome. this file, 1pnx, contains3 only molecules of the 30s ribosomal subunit. the 50s4 subunit is in the pdb file 1pny. Resolution 9.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	K	V	H	P	N	G	I	R	L	G	I	V	K	P	W	N	S	T	W	F	A	N	T	K	E	F	A	D	N	L	D	S	D	F	K	V	R	Q	Y	L	T	K	E	L	A	K	A	S	V	S	R	I	V	I	E	R	P	A	K	S	I	R	V	T	I	H	T	A	R	P	G	I	V	I	G	K	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	K	I	H	P	I	G	F	R	L	G	I	T	R	D	W	E	S	R	W	Y	A	G	K	K	Q	Y	R	H	L	L	L	E	D	Q	R	I	R	G	L	L	E	K	E	L	Y	S	A	G	L	A	R	V	D	I	E	R	A	A	D	N	V	A	V	T	V	H	V	A	K	P	G	V	V	I	G	R	G	G
Template Known Secondary structure												T	T	S	S				S							T	T	T																			T	T	T	T										S	S	S									S								S	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	V	E	K	L	R	K	V	V	A	D	I	A	G	V	P	A	Q	I	N	I	A	E	V	R	K	P	E	L	D	A	K	L	V	A	D	S	I	T	S	Q	L	E	R	R	V	M	F	R	R	A	M	K	R	A	V	Q	N	A	M	R	L	G	A	K	G	I	K	V	E	V	S	G	R	L	G	G	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	I	R	V	L	R	E	E	L	A	K	L	T	G	K	N	V	A	L	N	V	Q	E	V	Q	N	P	N	L	S	A	P	L	V	A	Q	R	V	A	E	Q	I	E	R	R	F	A	V	R	R	A	I	K	Q	A	V	Q	R	V	M	E	S	G	A	K	G	A	K	V	I	V	S	G	R	I	G	G	A	E
Template Known Secondary structure		S											T	T		T	T										S		G	G	G																T																T	S	S		S								S		G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	R	T	E	W	Y	R	E	G	R	V	P	L	H	T	L	R	A	D	I	D	Y	N	T	S	E	A	H	T	T	Y	G	V	I	G	V	K	V	W	I	F	K	G	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	R	T	E	W	A	A	Q	G	R	V	P	L	H	T	L	R	A	N	I	D	Y	G	F	A	L	A	R	T	T	Y	G	V	L	G	V	K	A	Y	I	F	L	G	E	V
Template Known Secondary structure		S				B					S				S	S	S	T	T													S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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