 |
Job Description | P08372 | Confidence | 2.81% | Date | Thu Jan 5 11:01:22 GMT 2012 |
Rank | 98 | Aligned Residues | 40 |
% Identity | 18% | Template | c3h0mE_ |
PDB info |
PDB header:ligase | Chain: E: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase |
PDBTitle: structure of trna-dependent amidotransferase gatcab from2 aquifex aeolicus
|
Resolution | 2.80 Å |
|
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | S | P | P | A | N | W | Q | V | N | R | M | Q | T | S | Q | A | G | C | V | S | I | S | V | T | L | V | S | P | G | G | R | E | G | E | M | T | R | L | H |
Query Conservation |   |
  |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |
|   |
|
|   |   |
|   |   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|   |   |   |
|   |
|   |
|   |   |   |   |
|   |   |
|   |
|   |
|   |
|
|
|
Template Sequence |   |
P | D | L | P | K | G | Y | Q | I | S | Q | Y | E | K | P | L | A | T | N | G | W | V | E | L | N | L | P | N | G | E | K | K | K | V | R | I | R | R | L | H |
Template Known Secondary structure |   |
T | T |
| T | T | S |  |  |  |  |  | S | S | S |
| S |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|