Job Description P28306 Confidence 18.32% Date Wed Jan 25 15:20:47 GMT 2012 Rank 25 Aligned Residues 94 % Identity 15% Template c3lwfD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator (np_470886.1)2 from listeria innocua at 2.06 a resolution Resolution 2.06 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		R	L	A	L	G	E	Q	L	Y	A	D	K	I	I	N	R	P	R	V	F	Q	W	L	L	R	I	E	P	D	L	S	H	F	K	A	G	T	Y	R	F	.	.	.	T	P	Q	M	T	V	R	E	M	L	K	L	L	E	S	G	K	E	A	Q	F	P	L	R	L	V	E	G	M	R	L	S	D	Y	L	K	Q
Query Conservation																																										.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.				.	.	.	.	.							.	.	.														.
Template Conservation																			.	.	.	.	.	.	.	.	.				.	.	.	.	.																							.
Template Sequence		L	E	Q	L	I	G	P	L	R	N	A	G	I	V	K	S	I	.	.	.	.	.	.	.	.	.	R	G	A	.	.	.	.	.	H	G	G	Y	V	L	N	G	D	P	E	K	I	T	A	G	D	I	I	R	T	L	.	E	G	P	I	V	L	V	E	S	X	E	D	E	E	A	A	Q	R	E	L	W	T	R
Template Known Secondary structure												T	T	S					.	.	.	.	.	.	.	.	.		S	T	.	.	.	.	.	T							S		T	T	T		B									.	S					S					T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.				.	.	.	.	.																							.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	E	A	P	Y	I	K	H	T	L	S	D	D	K	Y	A	T	V	A	Q	A	L	E	L	E	N	P	E	W	I	E	G	W	F	W
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		X	R	N	.	.	.	.	A	V	R	D	V	L	D	Q	T	T	L	S	D	L	L	K	H	S	T	D	S	E	L	T	D	G	Y	X	F
Template Known Secondary structure					.	.	.	.										B									S					S	S	S	S
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		107	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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