Return to main results Retrieve Phyre Job Id

Job DescriptionP28306
Confidence25.20%DateWed Jan 25 15:20:47 GMT 2012
Rank19Aligned Residues67
% Identity16%Templatec3lk2B_
PDB info PDB header:protein bindingChain: B: PDB Molecule:f-actin-capping protein subunit beta isoforms 1 and 2; PDBTitle: crystal structure of capz bound to the uncapping motif from carmil
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   226...230.........240.........250.........260........ .270. ........280.........290.......
Predicted Secondary structure 




















.


.


















Query SS confidence 










































.


.

























Query Sequence  DKVASVFINRLRIGMRLQTDPTVIYGMGERYNGKLSRADLETP. TAY. NTYTITGLPPGAIATPGADSLKAAAH
Query Conservation    

 

 


  

 



 

 
 
           

  
.


.


   






  

  

 


 
Alig confidence 




















....

















.


.



.




















Template Conservation 


   


 

 



  
 ....
  
 

 

















 .
  

   

  

 

  

Template Sequence  PSLCEDLLSSVDQPLKIARDK. . . . VVGKDYLLCDYNRDGDSYRSPWSNKYD. PPLEDGAMPSARLRKLEVEAN
Template Known Secondary structure  GGG




T....TTT
GGGTT
TTT

.S

SS




Template Predicted Secondary structure 




....




















.








Template SS confidence 









































































   33......40.........50... ......60.........70.........80 .........90.........100.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions