 |
Job Description | P28306 | Confidence | 5.64% | Date | Wed Jan 25 15:20:47 GMT 2012 |
Rank | 97 | Aligned Residues | 49 |
% Identity | 8% | Template | c2b5dX_ |
PDB info |
PDB header:hydrolase | Chain: X: PDB Molecule:alpha-amylase; |
PDBTitle: crystal structure of the novel alpha-amylase amyc from thermotoga2 maritima
|
Resolution | 2.20 Å |
|
  |   |
290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | S | L | K | A | A | A | H | P | A | K | T | P | Y | L | Y | F | V | A | D | G | K | G | G | H | T | F | N | T | N | L | A | S | H | N | K | S | V | Q | D | Y | L | K | V | L | K | E | K | N |
Query Conservation |   |
  |
|
|   |
|
|
|   |
|   |   |   |   |
|
|
|
|
|
|   |   |   |
|   |
|   |
|
|   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
Q | M | L | R | E | L | F | L | A | Q | S | S | D | W | A | F | I | M | T | T | R | T | S | V | Q | Y | A | E | N | R | T | K | L | H | I | K | R | F | L | N | L | Y | D | Q | L | V | S | G | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | B | G | G | G | T | S |
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
451 | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|