 |
Job Description | P0A7D4 | Confidence | 12.00% | Date | Wed Jan 25 15:20:17 GMT 2012 |
Rank | 83 | Aligned Residues | 50 |
% Identity | 14% | Template | d1t94a2 |
SCOP info | DNA/RNA polymerases
| DNA/RNA polymerases
| Lesion bypass DNA polymerase (Y-family), catalytic domain
|
Resolution | 2.40 |
|
  |   |
133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
. | . | 150 | . | . | . | |
. | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
| . |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | I | G | P | A | Y | E | D | K | V | A | R | R | G | L | . |
R | V | G | D | L | F | . |
D | K | E | T | F | A | E | K | L | K | E | V | M | E | Y | H | N | F | Q | L | V | N | Y | Y | K | A | E | A | V |
Query Conservation |   |
|
|
|
|
|
|   |
|
|   |   |
|   |
|
| . |
|   |   |
|
|   | . |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|   |   |   |
|
Template Sequence |   |
G | I | G | K | V | T | E | K | M | L | K | A | L | G | I | I | T | C | T | E | L | Y | Q | Q | R | A | L | L | S | L | L | F | S | E | T | S | W | H | Y | F | L | H | I | S | L | G | L | G | S | T | H | L |
Template Known Secondary structure |   |
T | S |
|  |  |  |  |  |  |  |  |  | T | T |
|
| B |  |  |  |  |  |  | T |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S |
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
356 | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|