Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7D4
Confidence17.57%DateWed Jan 25 15:20:17 GMT 2012
Rank46Aligned Residues57
% Identity14%Templated1oy5a_
SCOP infoalpha/beta knot alpha/beta knot tRNA(m1G37)-methyltransferase TrmD
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80.........90.........100.........110.........120.........130..
Predicted Secondary structure 






























Query SS confidence 






























































Query Sequence  GNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREKARGAKAIGTTGR
Query Conservation 
 



 
  
  

  
   

    

 

 

 

 
 
   
   
  

   




 
Alig confidence 
























.













.....

















Template Conservation 
 



  

   

          . 

  

 
  
 
.....  
  

    

 



Template Sequence  LPGMVLKPEPIYEAYDYVVENYGKP. FVLITEPWGEKLNQ. . . . . KLVNELSKKERIMIICGR
Template Known Secondary structure 
SS




.
TTB



.....T
S
B
Template Predicted Secondary structure 








.







.....





Template SS confidence 






























































   60.........70.........80.... .....90........ .100.........110......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions