Job Description P0A7D4 Confidence 100.00% Date Wed Jan 25 15:20:17 GMT 2012 Rank 7 Aligned Residues 413 % Identity 61% Template c3ue9A_ PDB info PDB header:ligase Chain: A: PDB Molecule:adenylosuccinate synthetase; PDBTitle: crystal structure of adenylosuccinate synthetase (ampsase) (pura) from2 burkholderia thailandensis Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	N	V	V	V	L	G	T	Q	W	G	D	E	G	K	G	K	I	V	D	L	L	T	E	R	A	K	Y	V	V	R	Y	Q	G	G	H	N	A	G	H	T	L	V	I	N	G	E	K	T	V	L	H	L	I	P	S	G	I	L	R	E	N	V	T	S	I	I	G	N	G	V	V	L	S	P	A	A	L	M
Query Conservation
Alig confidence																																								.	.			.	.	.	.
Template Conservation																																								.	.			.	.	.	.
Template Sequence		G	R	N	V	V	V	V	G	T	Q	W	G	D	E	G	K	G	K	I	V	D	W	L	T	D	H	A	Q	G	V	V	R	F	Q	G	G	H	N	.	.	H	T	.	.	.	.	G	K	K	T	I	L	R	L	I	P	S	G	I	M	R	E	G	V	A	C	Y	I	G	N	G	V	V	L	S	P	E	A	L	F
Template Known Secondary structure		T								S	S	S	S		S											T	T		S						S	B				.	.			.	.	.	.							S	S	S		G	G	G	G	S	T	T							T	T	B
Template Predicted Secondary structure																																								.	.			.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	M	K	E	L	E	D	R	G	I	P	V	R	E	R	L	L	L	S	E	A	C	P	L	I	L	D	Y	H	V	A	L	D	N	A	R	E	K	A	R	G	A	K	A	I	G	T	T	G	R	G	I	G	P	A	Y	E	D	K	V	A	R	R	G	L	R	V	G	D	L	F	D	K	E	T	F	A	E	K
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	I	G	E	L	E	E	A	G	L	S	V	R	E	R	L	F	I	S	E	A	T	T	L	I	L	P	Y	H	I	A	I	D	Q	A	R	E	.	.	.	.	.	.	.	.	.	.	A	R	R	G	I	G	P	A	Y	E	D	K	V	G	R	R	A	L	R	V	Q	D	L	F	D	A	R	T	F	A	D	R
Template Known Secondary structure										T	T				G	G	G					T	T																	.	.	.	.	.	.	.	.	.	.														T	T				B	G	G	G	G	G
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.											.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	E	V	M	E	Y	H	N	F	Q	L	V	N	Y	Y	K	A	E	A	V	D	Y	Q	K	V	L	D	D	T	M	A	V	A	D	I	L	T	S	M	V	V	D	V	S	D	L	L	D	Q	A	R	Q	R	G	D	F	V	M	F	E	G	A	Q	G	T	L	L	D	I	D	H	G	T	Y	P	Y	V	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	E	N	L	D	F	H	N	F	V	L	T	Q	Y	L	G	G	A	A	V	D	F	Q	A	T	L	D	T	M	L	G	Y	A	D	R	L	R	P	M	V	A	D	V	S	R	R	L	Y	E	E	N	H	A	G	R	N	L	L	F	E	G	A	Q	G	T	L	L	D	I	D	H	G	T	Y	P	F	V	T	S
Template Known Secondary structure																T	S																T	T					G	G	G														T	T									S		G	G	G		T	T	T	S	S	T	T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.									.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.
Query Sequence		S	N	T	T	A	G	G	V	A	T	G	S	G	L	G	P	R	Y	V	D	Y	V	L	G	I	L	K	A	Y	S	T	R	V	G	A	G	P	F	P	T	E	L	F	.	.	.	.	.	.	.	.	D	E	T	G	E	F	L	C	K	Q	G	N	E	F	G	A	T	T	G	R	R	R	R	T	G	W	L	D	T
Query Conservation																																													.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	C	V	A	G	A	A	A	A	G	A	G	V	G	P	Q	K	L	N	Y	I	L	G	I	T	K	A	Y	C	T	R	V	G	S	G	P	F	P	S	E	L	Y	D	A	D	N	P	S	R	Q	D	Q	I	G	I	T	L	A	N	V	G	K	E	F	G	S	V	T	G	R	P	R	R	T	G	W	L	D	A
Template Known Secondary structure		S			S	T	T							T			G	G	G										S						S	S	S			T	T					T	T		T	T		B											T	T		B		T	T	T			B
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	V	R	R	A	V	Q	L	N	S	L	S	G	F	C	L	T	K	L	D	V	L	D	G	L	K	E	V	K	L	C	V	A	Y	R	M	P	D	G	R	E	V	T	T	T	P	L	A	A	D	D	W	K	G	V	E	P	I	Y	E	T	M	P	G	W	S	E	S	T	F	G	V	K	D	R	S	G	L	P
Query Conservation
Alig confidence																																							.
Template Conservation																																							.
Template Sequence		A	A	L	R	R	S	I	Q	I	N	G	V	S	G	L	C	M	T	K	L	D	V	L	D	G	L	D	E	V	K	L	C	V	G	Y	K	I	.	D	G	E	D	A	D	L	L	P	R	G	A	A	E	V	A	R	C	E	P	V	Y	E	T	F	G	G	W	K	E	S	T	V	G	I	N	S	W	D	A	L	P
Template Known Secondary structure												T									G	G	G	G	T	T		S											.	T	T					S			S	S																			S			T	T			S	G	G	G	S
Template Predicted Secondary structure																																							.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	A	L	N	Y	I	K	R	I	E	E	L	T	G	V	P	I	D	I	I	S	T	G	P	D	R	T	E	T	M	I	L	R	D	P	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	A	R	A	Y	L	T	R	V	Q	E	V	A	G	V	P	I	D	M	V	S	T	G	P	D	R	D	E	T	I	L	L	R	H	P	F	K
Template Known Secondary structure																T	S								S	S	S	T	T	S				S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.