Job Description P0A7D4 Confidence 100.00% Date Wed Jan 25 15:20:17 GMT 2012 Rank 8 Aligned Residues 408 % Identity 47% Template c3r7tA_ PDB info PDB header:ligase Chain: A: PDB Molecule:adenylosuccinate synthetase; PDBTitle: crystal structure of adenylosuccinate synthetase from campylobacter2 jejuni Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	N	N	V	V	V	L	G	T	Q	W	G	D	E	G	K	G	K	I	V	D	L	L	T	E	R	A	K	Y	V	V	R	Y	Q	G	G	H	N	A	G	H	T	L	V	I	N	G	E	K	T	V	L	H	L	I	P	S	G	I	L	R	E	N	V	T	S	I	I	G	N	G	V	V	L	S	P	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	S	K	A	D	I	I	V	G	I	Q	W	G	D	E	G	K	G	K	V	V	D	K	L	C	E	N	Y	D	F	V	C	R	S	A	G	G	H	N	A	G	H	T	I	W	V	N	G	V	R	Y	A	L	H	L	X	P	S	G	V	L	H	P	R	C	I	N	I	I	G	N	G	V	V	V	S	P	E	V	L
Template Known Secondary structure												S	S	S		S											T	T		S						S	B		T	T	S	S						T	T						S	S	S		G	G	G	G	S	T	T							T	T	B
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	E	M	K	E	L	E	D	R	G	I	P	V	R	E	R	L	L	L	S	E	A	C	P	L	I	L	D	Y	H	V	A	L	D	N	A	R	E	K	A	R	G	A	K	A	I	G	T	T	G	R	G	I	G	P	A	Y	E	D	K	V	A	R	R	G	L	R	V	G	D	L	F	D	K	E	T	F	A	E
Query Conservation
Alig confidence										.	.	.	.																															.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.																															.	.	.	.	.	.	.	.
Template Sequence		I	A	E	X	A	Q	F	E	.	.	.	.	N	L	K	G	R	L	Y	I	S	D	R	A	H	L	N	L	K	H	H	S	L	I	D	I	A	K	E	K	L	K	.	.	.	.	.	.	.	.	G	K	G	I	G	P	S	Y	A	D	K	I	N	R	T	G	H	R	V	G	E	L	L	E	P	Q	R	L	C	E
Template Known Secondary structure						T	T	S	S	.	.	.	.			T	T	T					T	T	S																			.	.	.	.	.	.	.	.		T	T										T	T				B	G	G	G	G	G	S
Template Predicted Secondary structure										.	.	.	.																															.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.									.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	K	E	V	M	E	Y	H	N	F	Q	L	V	N	Y	Y	K	A	E	A	V	D	Y	Q	K	V	L	D	D	T	M	A	V	A	D	I	L	T	S	M	V	V	D	V	S	D	L	L	D	Q	A	R	Q	R	G	D	F	V	M	F	E	G	A	Q	G	T	L	L	D	I	D	H	G	T	Y	P	Y	V	T
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		A	L	I	K	D	F	E	A	N	K	T	F	F	.	E	X	L	E	I	E	I	P	S	A	E	E	L	L	A	D	L	K	R	F	N	E	I	L	T	P	Y	I	T	D	T	T	R	X	L	W	K	A	L	D	E	D	K	R	V	L	L	E	G	A	Q	G	S	X	L	D	I	D	H	G	T	Y	P	Y	V	T
Template Known Secondary structure										T					.			T	T																					G	G	G														T	T									S		G	G	G		T	T	T	S	S	T	T	S	S
Template Predicted Secondary structure															.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	N	T	T	A	G	G	V	A	T	G	S	G	L	G	P	R	Y	V	D	Y	V	L	G	I	L	K	A	Y	S	T	R	V	G	A	G	P	F	P	T	E	L	F	D	E	T	G	E	F	L	C	K	Q	G	N	E	F	G	A	T	T	G	R	R	R	R	T	G	W	L	D	T	V	A	V	R	R	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	S	T	I	S	A	G	T	L	T	G	L	G	L	N	P	K	E	A	G	N	I	I	G	I	V	K	A	Y	A	T	R	V	G	N	G	A	F	P	T	E	D	K	G	E	D	G	E	K	I	A	Q	I	G	K	E	I	G	V	S	T	G	R	K	R	R	C	G	W	F	D	A	V	A	V	R	Y	T	A
Template Known Secondary structure		S	S			S									T			G	G	G										S	S				S	S	S	S			T	T	B			S										T	T		B		T	T	T			B
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	N	S	L	S	G	F	C	L	T	K	L	D	V	L	D	G	L	K	E	V	K	L	C	V	A	Y	R	M	P	D	G	R	E	V	T	T	T	P	L	A	A	D	D	W	K	G	V	E	P	I	Y	E	T	M	P	G	W	S	E	S	T	F	G	V	K	D	R	S	G	L	P	Q	A	A	L	N	Y	I
Query Conservation
Alig confidence																																.												.	.	.																.
Template Conservation																																.												.	.	.																.
Template Sequence		R	L	N	G	L	D	A	L	S	L	X	K	L	D	V	L	D	G	F	E	K	I	K	I	C	R	A	Y	E	Y	.	K	G	X	E	I	D	Y	I	P	S	D	.	.	.	L	E	N	V	Q	P	I	Y	E	E	X	D	G	W	D	.	K	V	F	G	I	K	D	Y	D	L	L	P	E	N	A	K	K	Y	I
Template Known Secondary structure					T		S							G	G	G	G	T	T		S											.	T	T				S	S			S		.	.	.	G	G	G												S	.			T	T				G	G	G	S
Template Predicted Secondary structure																																.												.	.	.																.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.				.	.	.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	I	E	E	L	T	G	V	P	I	D	I	I	S	T	G	P	D	R	T	E	T	M	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	L	E	E	L	A	G	V	K	V	K	Y	I	S	T	S	P	E	R	D	D	T	I	I	L
Template Known Secondary structure									T	S								S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.