Job Description P0A7D4 Confidence 17.35% Date Wed Jan 25 15:20:17 GMT 2012 Rank 50 Aligned Residues 94 % Identity 14% Template c3ktsA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 Resolution 2.75 Å

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		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.			.	.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.															.
Query SS confidence																																																.	.															.
Query Sequence		D	T	V	A	V	R	R	A	V	Q	L	N	S	L	S	G	F	C	L	T	K	L	D	V	L	D	G	L	K	E	V	K	L	C	V	A	Y	R	M	P	D	G	R	E	V	T	.	.	T	T	P	L	A	A	D	D	W	K	G	V	E	P	.	I	Y	E	T	M	P	G	W	S	E	S	T	F	G	V	K	D
Query Conservation																																																.	.															.
Alig confidence																																									.	.	.					.	.															.										.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.																															.	.	.	.	.	.	.	.
Template Sequence		D	D	Y	A	I	D	F	L	C	T	E	I	C	P	D	G	I	I	S	T	R	G	N	A	I	M	K	A	K	Q	H	K	M	L	A	I	Q	R	L	.	.	.	F	M	I	D	S	S	A	Y	N	K	G	V	A	L	I	Q	K	V	Q	P	D	C	I	E	L	L	P	G	I	I	.	.	.	.	.	.	.	.
Template Known Secondary structure		S										T	T			S					S											T	T								.	.	.				S																	S							T	T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.																															.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	G	L	P	Q	A	A	L	N	Y	I	K	R	I	E	E	L	T	G	V	P	I	D	I	I	S	T	G	P	D	R	T	E	T	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	P	E	Q	V	Q	K	M	T	Q	K	L	H	I	P	V	I	A	G	G	L	I	E	T	S	E	Q	V	N
Template Known Secondary structure		.	.	.	.	.	.	.	.																			S	S			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions