Job Description P28638 Confidence 100.00% Date Thu Jan 5 11:45:07 GMT 2012 Rank 4 Aligned Residues 242 % Identity 23% Template d1booa_ SCOP info S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases Type II DNA methylase Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	N	E	A	K	T	I	I	H	G	D	A	L	A	E	L	K	K	I	P	A	E	S	V	D	L	I	F	A	D	P	P	Y	N	I	G	K	N	F	D	G	L	I	E	A	W	K	E	D	L	F	I	D	W	L	F	E	V	I	A	E	C	H	R	V	L	K	K	Q	G	S	M	Y	I	M	N	S	T	E
Query Conservation
Alig confidence																																										.	.
Template Conservation																																										.	.
Template Sequence		Y	T	T	S	N	G	S	M	Y	I	G	D	S	L	E	L	L	E	S	F	P	E	E	S	I	S	L	V	M	T	S	P	P	F	A	L	Q	R	K	K	.	.	E	Y	G	N	L	E	Q	H	E	Y	V	D	W	F	L	S	F	A	K	V	V	N	K	K	L	K	P	D	G	S	F	V	V	D	F	G	G	A
Template Known Secondary structure					S	S						S						G	G	G	S		S	S												S	S	S		S		.	.	S	S		S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		90	.													.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.								.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Query Sequence		N	M	.	.	.	.	.	.	.	.	.	.	.	.	P	F	I	D	L	Q	C	R	K	L	F	T	I	K	S	R	I	V	W	S	Y	D	S	S	G	V	.	.	.	.	.	.	.	Q	A	K	K	H	Y	G	S	M	Y	E	P	I	L	M	M	V	K	D	A	K	N	Y	T	F	N	G	D	A	I	L	V	E
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	M	K	G	V	P	A	R	S	I	Y	N	F	R	V	L	I	R	M	I	D	E	V	G	F	F	L	A	E	D	F	Y	W	F	N	P	S	K	L	P	S	P	I	E	W	V	N	K	R	K	I	R	V	K	D	A	V	N	T	V	W	W	F	S	K	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T																		T	T													S	S		T	T	S		T						T			S													S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.									.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.
Query Sequence		A	K	T	G	S	Q	R	A	L	I	D	Y	R	K	N	P	P	Q	P	Y	N	H	Q	K	V	P	G	N	V	W	D	F	P	R	V	R	Y	.	.	.	.	.	.	.	.	L	M	D	E	Y	E	N	H	P	T	Q	K	P	E	A	L	L	K	R	I	I	L	A	S	S	N	P	G	D	I	V	L	D	P	F
Query Conservation																																							.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	W	P	K	S	D	I	T	K	V	L	A	S	I	P	P	N	L	L	Q	I	S	N	S	E	S	N	G	Q	Y	L	A	N	C	K	L	M	G	I	K	A	H	P	A	R	F	P	A	K	L	P	E	F	F	I	R	M	L	T	E	P	D	D	L	V	V	D	I	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	S					G	G	G	S							S						S		S												T	T					S	S				T													T	T						T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	S	F	T	T	G	A	V	A	I	A	S	G	R	K	F	I	G	I	E	I	N	S	E	Y	I	K	M	G	L	R	R	L	D	V	A	S	H	Y	S	A	E	E	L	A	K	V	K	K	R	K	T	G	N	L	S
Query Conservation
Alig confidence																																						.
Template Conservation																																						.
Template Sequence		G	G	S	N	T	T	G	L	V	A	E	R	E	S	R	K	W	I	S	F	E	M	K	P	E	Y	V	A	A	S	A	F	R	F	L	D	.	N	N	I	S	E	E	K	I	T	D	I	Y	N	R	I	L	N	G	E	S
Template Known Secondary structure			T	T										T	T								S										G	G	G	S		.	S		S														T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions