Job Description P28638 Confidence 87.90% Date Thu Jan 5 11:45:07 GMT 2012 Rank 268 Aligned Residues 85 % Identity 19% Template c3pvcA_ PDB info PDB header:oxidoreductase, transferase Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of apo mnmc from yersinia pestis Resolution 2.31 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																		.	.	.
Query SS confidence												.	.																		.	.	.
Query Sequence		G	C	E	P	T	R	F	G	N	E	.	.	A	K	T	I	I	H	G	D	A	L	A	E	L	K	K	I	P	.	.	.	A	E	S	V	D	L	I	F	A	D	P	P	Y	N	I	G	K	N	F	D	G	L	I	E	A	W	K	E	D	L	F	I	D	W	L	F	E	V	I	A	E	C	H	R	V	L	K	K
Query Conservation												.	.																		.	.	.
Alig confidence												.	.																		.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Sequence		G	C	H	R	I	L	L	A	D	G	A	I	T	L	D	L	W	F	G	D	V	N	T	L	L	P	T	L	D	D	S	L	N	N	Q	V	D	A	W	F	L	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	P	.	N	P	D	X	W	N	E	Q	L	F	N	A	X	A	R	X	T	R	P
Template Known Secondary structure									T	T	T	T								S						G	G	G			G	G	G	T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			.			T	T		S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.															180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	S	M	Y	I	M	N	S	T	E	N	M	P	F	I	D	L	Q	C	R	K	L	F	T	I	K
Query Conservation
Alig confidence										.	.
Template Conservation										.	.
Template Sequence		G	G	T	F	S	T	F	T	.	.	A	A	G	F	V	R	R	G	L	Q	Q	A	G	F	N	V	T
Template Known Secondary structure								S		.	.												T	T
Template Predicted Secondary structure										.	.
Template SS confidence
		204	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions