 |
Job Description | P28638 | Confidence | 96.26% | Date | Thu Jan 5 11:45:07 GMT 2012 |
Rank | 174 | Aligned Residues | 54 |
% Identity | 20% | Template | c3fteA_ |
PDB info |
PDB header:transferase/rna | Chain: A: PDB Molecule:dimethyladenosine transferase; |
PDBTitle: crystal structure of a. aeolicus ksga in complex with rna
|
Resolution | 3.00 Å |
|
  |   |
202 | . | . | . | . | . | . | . | 210 | . | |
. | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | |
. | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | L | K | R | I | I | L | A | S | . |
S | N | P | G | D | I | V | L | D | P | F | A | G | S | F | T | . |
T | G | A | V | A | I | A | S | G | R | K | F | I | G | I | E | I | N | S | E | Y | I | K | M | G | L | R | R |
Query Conservation |   |
  |
|   |
|   |
|
|   |   |   | . |
|   |
|
|
|   |
|
|
|
|
|   |
|
|
|
| . |
|   |   |
|
|   |   |
|
|
|   |   |
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |
|   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |
|
|   |   |
Template Sequence |   |
G | V | L | K | K | I | A | E | E | L | N | I | E | E | G | N | T | V | V | E | V | G | G | G | T | G | N | L | T | K | V | L | L | Q | H | P | L | K | K | L | Y | V | I | E | L | D | R | E | M | V | E | N | L | K | S | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
| T | T |
|  |  |  |  |  | S |
|
| S | S |  |  |  |  |  |  | T | T | S |
|
| S |  |  |  |  |  |
| S |
| T | T | T | G | G | G | G |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|