Return to main results Retrieve Phyre Job Id

Job DescriptionP28638
Confidence70.34%DateThu Jan 5 11:45:07 GMT 2012
Rank288Aligned Residues60
% Identity12%Templatec3adnB_
PDB info PDB header:transferaseChain: B: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from e. coli.
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   202.......210.........220.........230..... ....240.........250.........260.
Predicted Secondary structure 









..



Query SS confidence 

































. .

























Query Sequence  ALLKRIILASSNPGDIVLDPFAGSFTTGAVAIAS. . GRKFIGIEINSEYIKMGLRRLDVASH
Query Conservation   
 
 

   
 


 




 




  

  
..

  




   
   
  

     
Alig confidence 

































..

























Template Conservation 
 
 
  
     
  




 
 
              
  




 

  

        
Template Sequence  EMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA
Template Known Secondary structure  SS


S

SSTT
TT


S
ST
Template Predicted Secondary structure 




















Template SS confidence 





























































   65....70.........80.........90.........100.........110.........120......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions