Job Description P28638 Confidence 100.00% Date Thu Jan 5 11:45:07 GMT 2012 Rank 5 Aligned Residues 214 % Identity 26% Template c2zifB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative modification methylase; PDBTitle: crystal structure of ttha0409, putative dna modification2 methylase from thermus thermophilus hb8- complexed with s-3 adenosyl-l-methionine Resolution 2.40 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		A	K	T	I	I	H	G	D	A	L	A	E	L	K	K	I	P	A	E	S	V	D	L	I	F	A	D	P	P	Y	N	I	G	K	N	F	D	G	L	I	E	A	W	K	E	D	L	F	I	D	W	L	F	E	V	I	A	E	C	H	R	V	L	K	K	Q	G	S	M	Y	I	M	N	S	T	E	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																								.	.	.	.	.	.																																	.	.	.	.
Template Conservation																																								.	.	.	.	.	.
Template Sequence		V	H	R	L	H	V	G	D	A	R	E	V	L	A	S	F	P	E	A	S	V	H	L	V	V	T	S	P	P	Y	W	T	L	G	H	I	E	D	.	.	.	.	.	.	Y	E	A	F	L	D	E	L	D	R	V	W	R	E	V	F	R	L	L	V	P	G	G	R	L	V	I	V	V	G	D	V	A	V	A	R
Template Known Secondary structure								S								T	S		T	T																				.	.	.	.	.	.																																			T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
													90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	N	M	P	F	I	D	L	Q	C	R	K	L	F	T	I	K	S	R	I	V	W	S	Y	D	S	S	G	V	Q	A	K	K	H	Y	G	S	M	Y	E	P	I	L	M	M	V	K	D	A	K	N	Y	T	F	N	G	D	A	I	L	V	E	A	K	T	G	S	Q	R	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																										.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.																																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	F	G	R	H	L	V	F	P	L	H	A	D	I	Q	V	R	C	R	K	L	G	F	D	N	L	N	P	I	I	W	H	K	H	T	.	P	Y	E	P	G	A	I	I	K	T	E	I	E	Y	I	L	M	Q	R	K	P	G	G	Y	R	K	P	T	Q	E	Q	R	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	S	S	S																T	T	T														.				T	T																	S											.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.																																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	D	Y	R	K	N	P	P	Q	P	Y	N	H	Q	K	V	P	G	N	V	W	D	F	P	R	V	R	Y	L	M	D	E	Y	E	N	H	P	T	Q	K	P	E	A	L	L	K	R	I	I	L	A	S	S	N	P	G	D	I	V	L	D	P	F	A	G	S	F	T	T	G	A	V	A	I	A	S	G	R	K
Query Conservation
Alig confidence		.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	E	K	S	R	L	P	K	E	D	F	H	R	F	F	R	Q	I	W	D	D	.	.	.	.	.	.	.	.	.	.	I	P	G	E	A	P	F	P	L	E	L	A	E	R	L	V	R	M	F	S	F	V	G	D	V	V	L	D	P	F	A	G	T	G	T	T	L	I	A	A	A	R	W	G	R	R
Template Known Secondary structure		.	.	.	.														S	S	S				S	.	.	.	.	.	.	.	.	.	.	S						S															T	T						T	T		T	T	T									T	T
Template Predicted Secondary structure		.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
						188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.											.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	G	I	E	I	N	S	E	Y	I	K	M	G	L	R	R	L	D	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	G	V	E	L	V	P	R	Y	A	Q	L	A	K	E	R	F	A	R	E
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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