Job Description P28638 Confidence 95.70% Date Thu Jan 5 11:45:07 GMT 2012 Rank 194 Aligned Residues 103 % Identity 17% Template c2qy6A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0209 protein yfck; PDBTitle: crystal structure of the n-terminal domain of upf0209 protein yfck2 from escherichia coli o157:h7 Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.								.	.
Query SS confidence																																	.	.	.								.	.
Query Sequence		T	G	C	E	P	T	R	F	G	N	E	A	K	T	I	I	H	G	D	A	L	A	E	L	K	K	I	P	A	E	S	.	.	.	V	D	L	I	F	A	D	.	.	P	P	Y	N	I	G	K	N	F	D	G	L	I	E	A	W	K	E	D	L	F	I	D	W	L	F	E	V	I	A	E	C	H	R	V	L	K
Query Conservation																																	.	.	.								.	.
Alig confidence																																	.	.	.								.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	C	H	R	L	L	L	D	R	V	T	L	D	L	W	F	G	D	I	N	E	L	I	S	Q	L	D	D	S	L	N	Q	K	V	D	A	W	F	L	D	G	F	A	P	A	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	M	W	T	Q	N	L	F	N	A	M	A	R	L	A	R
Template Known Secondary structure		S																	S						G	G	G	S		G	G	G	T	T									S	S		T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.																.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	G	S	M	Y	I	M	N	S	T	E	N	M	P	F	I	D	L	Q	C	R	K	L	F	T	I	K	S	R	I	V	W	S	Y	D	S	S	G	V	Q	A	K	K	H	Y	G	S	M	Y	E
Query Conservation
Alig confidence											.	.																	.	.	.	.	.	.
Template Conservation											.	.																	.	.	.	.	.	.
Template Sequence		P	G	G	T	L	A	T	F	T	.	.	S	A	G	F	V	R	R	G	L	Q	E	A	G	F	T	M	.	.	.	.	.	.	Q	K	R	K	G	F	G	R	K	R	E	M	L	C	G	V	M	E
Template Known Secondary structure									S		.	.													T				.	.	.	.	.	.						S	T	T
Template Predicted Secondary structure											.	.																	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.							.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions