 |
| Job Description | P28638 | | Confidence | 97.99% | Date | Thu Jan 5 11:45:07 GMT 2012 |
| Rank | 28 | Aligned Residues | 54 |
| % Identity | 17% | Template | c1g38A_ |
| PDB info |
PDB header:transferase/dna | Chain: A: PDB Molecule:modification methylase taqi; |
PDBTitle: adenine-specific methyltransferase m. taq i/dna complex
|
| Resolution | 2.00 Å |
|
|   |   |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | |
|
|
. | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  | . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
P | E | A | L | L | K | R | I | I | L | A | S | S | N | . |
P | G | D | I | V | L | D | P | F | A | G | S | F | T | T | G | A | V | A | I | A | S | G | R | K | . |
. |
. |
F | I | G | I | E | I | N | S | E | Y | I | K | M | G | L |
| Query Conservation |   |
|   |   |
|   |
|   |
|
|   |   |   |
|   | . |
|
|
|   |
|
|
|
|
|   |
|
|
|
|
|   |   |
|
|   |   |
|
|
|   | . | . | . |   |
|
|
|
|
|   |   |   |
|   |   |   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |
|   |   |
|
|   |
| Template Sequence |   |
P | P | E | V | V | D | F | M | V | S | L | A | E | A | P | R | G | G | R | V | L | E | P | A | C | A | H | G | P | F | L | R | A | F | R | E | A | H | G | T | G | Y | R | F | V | G | V | E | I | D | P | K | A | L | D | L | P | P |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | T | T |
|
|
|
| T | T |
|  |  |  |  |  | T |
| T | T |
|  |  |  |  |  |  |  |  |  |  |
| S |
| S |  |  |  |  |  |  | S |
| T | T | T |
|
|
|
| T |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|